RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA763718" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12685082 12685082 PRJNA763718_S_NODE_4050_length_218_cov_5.276243_g3842_i0 PRJNA763718 4050 218 5.276243 11.50220974 Stylommatophora 6527 Mollusca Mollusca 110 1.13e-19   NTclustered gi|145652941|gb|EF015440.1| 424226 g3842 i0 85.321 43.8302752293578 109 12 49 3 5 110 1526 1419 Elisolimax flavescens cytochrome oxidase subunit I (COI) gene, partial cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 9555 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Urocyclidae Elisolimax Elisolimax flavescens
17322518 17322518 PRJNA763718_S_NODE_8414_length_153_cov_0.982759_g8206_i0 PRJNA763718 8414 153 0.982759 1.50362127 Pomacea canaliculata 400727 Mollusca Mollusca 56.5 0.001   NTclustered gi|1397687243|ref|XM_025237295.1| 400727 g8206 i0 92.308 0.509803921568627 39 3 25 0 28 66 288 250 PREDICTED: Pomacea canaliculata 14-3-3 protein epsilon-like (LOC112563363), transcript variant X2, mRNA blastn 78 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;