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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA763718" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJNA763718 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2020233 2020233 PRJNA763718_S_NODE_8262_length_154_cov_1.324786_g8054_i0 PRJNA763718 8262 154 1.324786 2.04017044 uncultured dinoflagellate 187300 SAR_Eukaryotes SAR_Eukaryotes 117 4.42e-22   NTclustered gi|309254527|gb|GU554463.1| 187300 g8054 i0 81.579 0.987012987012987 152 18 95 7 8 154 353 207 uncultured dinoflagellate clone 1061048708507_r mRNA sequence blastn 152 117 1 Eukaryota Sar     Dinophyceae       uncultured dinoflagellate
2480859 2480859 PRJNA763718_S_NODE_4702_length_202_cov_3.787879_g4494_i0 PRJNA763718 4702 202 3.787879 7.65151558 Condylostoma 40632 SAR_Eukaryotes SAR_Eukaryotes 119 1.71e-22   NTclustered gi|1216628401|gb|KX099195.1| 396044 g4494 i0 86.486 46.8465346534653 111 12 54 3 49 158 112 4 Condylostoma spatiosum clone CS2 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence blastn 9463 119 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Condylostomatidae Condylostoma Condylostoma spatiosum
3757153 3757153 PRJNA763718_S_NODE_3483_length_238_cov_5.855721_g3275_i0 PRJNA763718 3483 238 5.855721 13.93661598 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 180 9.399999999999999e-41   NTclustered gi|323690576|gb|GU935635.1| 88167 g3275 i0 80.658 91.436974789916 243 37 100 8 1 238 894 1131 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 21762 180 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
4572530 4572530 PRJNA763718_S_NODE_6224_length_175_cov_1.717391_g6016_i0 PRJNA763718 6224 175 1.717391 3.00543425 Plasmodium inui 52288 SAR_Eukaryotes SAR_Eukaryotes 141 3.06e-29   NTclustered gi|672189677|ref|XM_008816915.1| 1237626 g6016 i0 88.136 10.7485714285714 118 14 67 0 3 120 558 675 Plasmodium inui San Antonio 1 60S ribosomal protein L8 partial mRNA blastn 1881 141 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
6309469 6309469 PRJNA763718_S_NODE_7885_length_157_cov_1.300000_g7677_i0 PRJNA763718 7885 157 1.3 2.041 Placidia 159341 SAR_Eukaryotes SAR_Eukaryotes 97.1 5.9e-16   NTclustered gi|2163288147|gb|MZ440320.1| 2810144 g7677 i0 93.75 32.1910828025478 64 4 41 0 94 157 1284 1221 Placidia abyssalis strain HFCC745 elongation factor 1-alpha (ef1a) mRNA, complete cds blastn 5054 97.1 1 Eukaryota Sar     Bigyra Placidida Placidiaceae Placidia Placidia abyssalis
15233900 15233900 PRJNA763718_S_NODE_2892_length_265_cov_1.412281_g2684_i0 PRJNA763718 2892 265 1.412281 3.74254465 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 279 1.02e-70   NTclustered gi|92790159|emb|AJ965265.1| 5987 g2684 i0 86.26 236.803773584906 262 30 98 6 7 265 494 236 Isotricha prostoma partial mRNA for Polyubiqutin 3 (polyubiqutin 3 gene) blastn 62753 279 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha prostoma
17322519 17322519 PRJNA763718_S_NODE_8614_length_151_cov_2.333333_g8406_i0 PRJNA763718 8614 151 2.333333 3.52333283 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 102 1.21e-17   NTclustered gi|2794937619|ref|XM_067858233.1| 5871 g8406 i0 94.03 23.887417218543 67 4 44 0 73 139 190 124 Babesia caballi fumarate reductase (BcabD6B2_17000), partial mRNA blastn 3607 102 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
18595827 18595827 PRJNA763718_S_NODE_2055_length_326_cov_9.297578_g1847_i0 PRJNA763718 2055 326 9.297578 30.31010428 Chromulina sp. SAG 17.97 984084 SAR_Eukaryotes SAR_Eukaryotes 104 8.34e-18   NTclustered gi|323690579|gb|GU935638.1| 984084 g1847 i0 82.906 11.3803680981595 117 18 36 2 33 148 1589 1474 Chromulina sp. SAG 17.97 28S ribosomal RNA gene, partial sequence blastn 3710 104 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Chromulina Chromulina sp. SAG 17.97
18595834 18595834 PRJNA763718_S_NODE_4195_length_214_cov_3.327684_g3987_i0 PRJNA763718 4195 214 3.327684 7.12124376 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 159 1.08e-34   NTclustered gi|323690576|gb|GU935635.1| 88167 g3987 i0 80.556 51.7242990654206 216 35 100 6 1 214 2514 2304 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 11069 159 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
21607586 21607586 PRJNA763718_S_NODE_5417_length_188_cov_1.721854_g5209_i0 PRJNA763718 5417 188 1.721854 3.23708552 root 1 Root_unresolved Root_unresolved 71.3 4.45e-8   NTclustered gi|159993|gb|M34540.1|PARCAM 5888 g5209 i0 88.136 2.20744680851064 59 7 31 0 130 188 563 505 P.tetraurelia calmodulin gene, complete cds blastn 415 71.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
23697136 23697136 PRJNA763718_S_NODE_4159_length_215_cov_7.275281_g3951_i0 PRJNA763718 4159 215 7.275281 15.64185415 uncultured marine bolidophyte 588886 SAR_Eukaryotes SAR_Eukaryotes 200 6.4e-47   NTclustered gi|223047886|gb|FJ032654.1| 588886 g3951 i0 91.156 73.4790697674419 147 13 68 0 1 147 1904 1758 Uncultured marine bolidophyte clone DH114_3A83 28S ribosomal RNA gene, partial sequence blastn 15798 200 1 Eukaryota Sar     Bolidophyceae       uncultured marine bolidophyte

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;