contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 743984 | 743984 | PRJNA763243_P_NODE_69661_length_222_cov_6.832215_g69315_i0 | PRJNA763243 | 69661 | 222 | 6.832215 | 15.1675173 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 387 | 4.749999999999998e-103 | NTclustered | gi|544315340|gb|KF318250.1| | 156588 | g69315 | i0 | 99.07 | 95.8378378378378 | 215 | 2 | 97 | 0 | 4 | 218 | 414 | 628 | Uncultured Verrucomicrobia bacterium clone ATW092 16S ribosomal RNA gene, partial sequence | blastn | 21276 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 2019113 | 2019113 | PRJNA763243_P_NODE_30202_length_308_cov_9.234043_g29856_i0 | PRJNA763243 | 30202 | 308 | 9.234043 | 28.44085244 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 213 | 1.25e-50 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g29856 | i0 | 93.706 | 5.96103896103896 | 143 | 8 | 94 | 1 | 7 | 148 | 1316393 | 1316251 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 1836 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4571861 | 4571861 | PRJNA763243_P_NODE_49524_length_255_cov_2.291209_g49178_i0 | PRJNA763243 | 49524 | 255 | 2.291209 | 5.84258295 | Akkermansia sp. N21116 | 3040764 | Bacteria | Bacteria | 322 | 1.6e-83 | NTclustered | gi|2634178342|gb|CP139035.1| | 3040764 | g49178 | i0 | 91.213 | 256.862745098039 | 239 | 17 | 93 | 3 | 14 | 250 | 790668 | 790904 | Akkermansia sp. N21116 chromosome, complete genome | blastn | 65500 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia sp. N21116 | |
| 5847255 | 5847255 | PRJNA763243_P_NODE_58005_length_245_cov_6.430233_g57659_i0 | PRJNA763243 | 58005 | 245 | 6.430233 | 15.75407085 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 420 | 5.26e-113 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g57659 | i0 | 97.942 | 284.102040816327 | 243 | 3 | 98 | 1 | 5 | 245 | 1010010 | 1009768 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 69605 | 420 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 10948145 | 10948145 | PRJNA763243_P_NODE_71569_length_213_cov_4.157143_g71223_i0 | PRJNA763243 | 71569 | 213 | 4.157143 | 8.85471459 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 183 | 6.369999999999998e-42 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g71223 | i0 | 82.71 | 10.0892018779343 | 214 | 29 | 99 | 8 | 1 | 210 | 16712 | 16503 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 2149 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 12223707 | 12223707 | PRJNA763243_P_NODE_71290_length_214_cov_5.936170_g70944_i0 | PRJNA763243 | 71290 | 214 | 5.93617 | 12.7034038 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 270 | 4.779999999999999e-68 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g70944 | i0 | 99.329 | 119.504672897196 | 149 | 1 | 89 | 0 | 43 | 191 | 160 | 12 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 25574 | 270 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 14772929 | 14772929 | PRJNA763243_P_NODE_71172_length_214_cov_28.978723_g70826_i0 | PRJNA763243 | 71172 | 214 | 28.978723 | 62.01446722 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 315 | 2.18e-81 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g70826 | i0 | 94.175 | 158.406542056075 | 206 | 12 | 96 | 0 | 5 | 210 | 5153088 | 5152883 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 33899 | 315 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19869834 | 19869834 | PRJNA763243_P_NODE_2716_length_812_cov_6.143437_g2452_i0 | PRJNA763243 | 2716 | 812 | 6.143437 | 49.88470844 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 1360 | 0 | NTclustered | gi|164510704|emb|AJ966883.1| | 48466 | g2452 | i0 | 99.598 | 247.512315270936 | 746 | 2 | 99 | 1 | 1 | 746 | 4778 | 4034 | Prosthecobacter vanneervenii 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 12252 | blastn | 200980 | 1360 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 21146216 | 21146216 | PRJNA763243_P_NODE_557_length_1540_cov_14.133606_g453_i0 | PRJNA763243 | 557 | 1540 | 14.133606 | 217.6575324 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 2806 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g453 | i0 | 99.61 | 224.97012987013 | 1537 | 6 | 99 | 0 | 4 | 1540 | 279 | 1815 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 346454 | 2806 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 22420316 | 22420316 | PRJNA763243_P_NODE_29178_length_310_cov_4.139241_g28832_i0 | PRJNA763243 | 29178 | 310 | 4.139241 | 12.8316471 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 263 | 1.23e-65 | NTclustered | gi|294828894|gb|GU929353.1| | 156588 | g28832 | i0 | 99.31 | 90.5774193548387 | 145 | 1 | 95 | 0 | 4 | 148 | 188 | 332 | Uncultured Verrucomicrobia bacterium clone 45_b6 16S ribosomal RNA gene, partial sequence | blastn | 28079 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;