RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763243 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205037 1205037 PRJNA763243_P_NODE_17961_length_369_cov_16.466216_g17616_i0 PRJNA763243 17961 369 16.466216 60.76033704 Adinetidae 104780 Rotifera other_Eukaryota 673 0   NTclustered gi|2537903787|gb|KM043252.2| 104782 g17616 i0 99.728 99.2845528455285 367 1 99 0 1 367 902 536 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 36636 673 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
1205103 1205103 PRJNA763243_P_NODE_32401_length_299_cov_8.991150_g32055_i0 PRJNA763243 32401 299 8.99115 26.8835385 Ploima 84394 Rotifera other_Eukaryota 466 8.38e-127   NTclustered gi|61200802|gb|AY829083.1| 96446 g32055 i0 95.254 95.9966555183946 295 13 99 1 4 298 1423 1716 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 28703 466 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
3756903 3756903 PRJNA763243_P_NODE_24583_length_325_cov_14.234127_g24237_i0 PRJNA763243 24583 325 14.234127 46.26091275 Opisthokonta 33154 Rotifera other_Eukaryota 555 1.9099999999999995e-153   NTclustered gi|259129963|gb|GQ398061.1| 104782 g24237 i0 98.113 79.3138461538462 318 6 98 0 5 322 7005 6688 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 25777 560 0.991071428571429 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
4571446 4571446 PRJNA763243_P_NODE_32184_length_300_cov_4.493392_g31838_i0 PRJNA763243 32184 300 4.493392 13.480176 Lepadella patella 231622 Rotifera other_Eukaryota 396 1.12e-105   NTclustered gi|83285192|gb|DQ297739.1| 231622 g31838 i0 94.574 88.9766666666667 258 10 85 4 45 300 1 256 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 26693 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
7583290 7583290 PRJNA763243_P_NODE_48466_length_257_cov_4.255435_g48120_i0 PRJNA763243 48466 257 4.255435 10.93646795 Adineta 104781 Rotifera other_Eukaryota 403 5.599999999999998e-108   NTclustered gi|1005055598|gb|KU860741.1| 1813167 g48120 i0 95.294 84.5214007782101 255 10 99 2 1 254 383 130 Adineta vaga complex sp. D JFF-2016 isolate H3-14b 28S ribosomal RNA gene, partial sequence blastn 21722 403 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. D JFF-2016
10948113 10948113 PRJNA763243_P_NODE_70229_length_219_cov_7.205479_g69883_i0 PRJNA763243 70229 219 7.205479 15.77999901 Adineta vaga 104782 Rotifera other_Eukaryota 272 1.37e-68   NTclustered gi|259129963|gb|GQ398061.1| 104782 g69883 i0 99.333 2.72146118721461 150 1 100 0 70 219 10370 10221 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 596 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11409079 11409079 PRJNA763243_P_NODE_5389_length_610_cov_7.376164_g5066_i0 PRJNA763243 5389 610 7.376164 44.9946004 Adineta 104781 Rotifera other_Eukaryota 1101 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g5066 i0 99.504 42.4885245901639 605 3 99 0 3 607 2105 1501 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 25918 1101 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13959374 13959374 PRJNA763243_P_NODE_74691_length_199_cov_9.595238_g74345_i0 PRJNA763243 74691 199 9.595238 19.09452362 Eurotatoria 2816136 Rotifera other_Eukaryota 363 7.019999999999998e-96   NTclustered gi|72153731|gb|DQ089739.1| 104782 g74345 i0 100 96.1758793969849 196 0 98 0 4 199 691 496 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 19139 363 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22883040 22883040 PRJNA763243_P_NODE_67998_length_228_cov_6.406452_g67652_i0 PRJNA763243 67998 228 6.406452 14.60671056 Eurotatoria 2816136 Rotifera other_Eukaryota 353 4.98e-93   NTclustered gi|259129963|gb|GQ398061.1| 104782 g67652 i0 95.111 93.2719298245614 225 10 99 1 4 228 7019 7242 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 21266 353 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
24969251 24969251 PRJNA763243_P_NODE_12980_length_423_cov_4.185714_g12635_i0 PRJNA763243 12980 423 4.185714 17.70557022 Adineta vaga 104782 Rotifera other_Eukaryota 760 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g12635 i0 99.286 58.1678486997636 420 3 99 0 1 420 2806 2387 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 24605 760 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;