RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763243 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2019983 2019983 PRJNA763243_P_NODE_68182_length_228_cov_2.096774_g67836_i0 PRJNA763243 68182 228 2.096774 4.78064472 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.02   NTclustered gi|687242759|emb|LK428020.1| 57078 g67836 i0 100 0.12280701754386 28 0 12 0 7 34 1278 1251 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0033798 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
8858341 8858341 PRJNA763243_P_NODE_36767_length_285_cov_4.287736_g36421_i0 PRJNA763243 36767 285 4.287736 12.2200476 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 108 5.54e-19   NTclustered gi|138752562|emb|AM489593.1| 421533 g36421 i0 82.927 10.4947368421053 123 18 42 3 1 120 1556 1434 Paradeontacylix ibericus partial 28S rRNA gene blastn 2991 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Aporocotylidae Paradeontacylix Paradeontacylix iberica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;