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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA763243 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3295157 3295157 PRJNA763243_P_NODE_66323_length_233_cov_69.656250_g65977_i0 PRJNA763243 66323 233 69.65625 162.2990625 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 189 1.5199999999999996e-43   NTclustered gi|2874253709|emb|OY969474.1| 171953 g65977 i0 87.73 0.699570815450644 163 18 70 2 4 165 829624 829463 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 163 189 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7122630 7122630 PRJNA763243_P_NODE_66686_length_232_cov_14.327044_g66340_i0 PRJNA763243 66686 232 14.327044 33.23874208 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 322 1.43e-83   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g66340 i0 93.578 75.4655172413793 218 10 93 4 15 230 3557735 3557950 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 17508 322 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
8397354 8397354 PRJNA763243_P_NODE_75387_length_196_cov_18.869919_g75041_i0 PRJNA763243 75387 196 18.869919 36.98504124 Acidobacteriota bacterium 1978231 Bacteria Bacteria 213 7.35e-51   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g75041 i0 86.979 50.515306122449 192 22 97 3 1 190 317492 317302 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 9901 213 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
17321762 17321762 PRJNA763243_P_NODE_46674_length_261_cov_2.063830_g46328_i0 PRJNA763243 46674 261 2.06383 5.3865963 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 246 1.02e-60   NTclustered gi|2874253713|emb|OY969555.1| 171953 g46328 i0 84.4 228.846743295019 250 39 96 0 12 261 72683 72434 MAG: uncultured Acidobacteriota bacterium isolate MFD02248.bin.1.120 genome assembly, chromosome: 1 blastn 59729 246 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
18594541 18594541 PRJNA763243_P_NODE_23875_length_329_cov_3.765625_g23529_i0 PRJNA763243 23875 329 3.765625 12.38890625 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 196 1.35e-45   NTclustered gi|2874254108|emb|OY970193.1| 171953 g23529 i0 87.952 50.7203647416413 166 20 50 0 81 246 1689537 1689372 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 16687 196 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23697005 23697005 PRJNA763243_P_NODE_73319_length_205_cov_4.098485_g72973_i0 PRJNA763243 73319 205 4.098485 8.40189425 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 285 1.6199999999999998e-72   NTclustered gi|380846335|gb|JQ795279.1| 171953 g72973 i0 94.595 95.9707317073171 185 8 89 2 12 194 185 1 Uncultured Acidobacteria bacterium clone Aug-KB420 16S ribosomal RNA gene, partial sequence blastn 19674 285 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24969828 24969828 PRJNA763243_P_NODE_36380_length_286_cov_5.037559_g36034_i0 PRJNA763243 36380 286 5.037559 14.40741874 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 472 1.71e-128   NTclustered gi|2874254027|emb|OY970352.1| 171953 g36034 i0 97.133 505.56993006993 279 8 98 0 4 282 2365932 2365654 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 144593 472 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;