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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 19 ✖

bioproject 1

  • PRJNA763243 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742864 742864 PRJNA763243_P_NODE_22201_length_339_cov_5.037594_g21855_i0 PRJNA763243 22201 339 5.037594 17.07744366 Betaretrovirus squmon 3427297 Viruses Viruses 588 1.97e-163   NTclustered gi|1666023499|gb|MK561030.1| 11856 g21855 i0 97.935 4.18289085545723 339 7 100 0 1 339 3608 3946 Squirrel monkey retrovirus, complete genome blastn 1418 588 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
1205101 1205101 PRJNA763243_P_NODE_3221_length_752_cov_5.014728_g2944_i0 PRJNA763243 3221 752 5.014728 37.71075456 Betaretrovirus 140052 Viruses Viruses 1225 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g2944 i0 99.263 12.7061170212766 678 5 90 0 1 678 4759 5436 Squirrel monkey retrovirus - HLB, complete genome blastn 9555 1225 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
7583216 7583216 PRJNA763243_P_NODE_32406_length_299_cov_7.977876_g32060_i0 PRJNA763243 32406 299 7.977876 23.85384924 root 1 Root_unresolved Root_unresolved 534 2.26e-147   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g32060 i0 98.997 100.257525083612 299 2 100 1 1 299 1660 1957 Moloney murine leukemia virus, complete genome blastn 29977 534 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
8858260 8858260 PRJNA763243_P_NODE_1987_length_922_cov_3.783274_g1756_i0 PRJNA763243 1987 922 3.783274 34.88178628 Betaretrovirus 140052 Viruses Viruses 1664 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g1756 i0 99.241 3.73101952277657 922 7 100 0 1 922 1159 2080 Squirrel monkey retrovirus, complete genome blastn 3440 1664 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
8858332 8858332 PRJNA763243_P_NODE_3407_length_734_cov_5.065053_g3127_i0 PRJNA763243 3407 734 5.065053 37.17748902 Gammaretrovirus 153135 Viruses Viruses 1328 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g3127 i0 99.319 82.8841961852861 734 5 100 0 1 734 4583 5316 Moloney murine leukemia virus, complete genome blastn 60837 1328 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
9671054 9671054 PRJNA763243_P_NODE_1288_length_1091_cov_5.167976_g1108_i0 PRJNA763243 1288 1091 5.167976 56.38261816 Betaretrovirus squmon 3427297 Viruses Viruses 1977 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g1108 i0 99.358 3.58020164986251 1091 7 100 0 1 1091 3616 2526 Squirrel monkey retrovirus, complete genome blastn 3906 1977 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
12223277 12223277 PRJNA763243_P_NODE_54430_length_249_cov_0.875000_g54084_i0 PRJNA763243 54430 249 0.875 2.17875 Gammaretrovirus momursar 3428958 Viruses Viruses 446 8.849999999999999e-121   NTclustered gi|332197|gb|M30733.1|MSVP21A 11809 g54084 i0 100 62.2369477911647 241 0 97 0 6 246 960 720 Murine sarcoma virus p21 ras protein, complete cds blastn 15497 446 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus momursar
12684793 12684793 PRJNA763243_P_NODE_12590_length_429_cov_2.848315_g12245_i0 PRJNA763243 12590 429 2.848315 12.21927135 Betaretrovirus 140052 Viruses Viruses 571 2.569999999999999e-158   NTclustered gi|332630|gb|M13260.1|PCSRVLTR 11856 g12245 i0 96.532 6.88111888111888 346 11 100 1 1 345 214 559 Squirrel monkey retrovirus 5' LTR blastn 2952 571 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
13496763 13496763 PRJNA763243_P_NODE_291_length_1907_cov_5.963468_g230_i0 PRJNA763243 291 1907 5.963468 113.72333476 Betaretrovirus squmon 3427297 Viruses Viruses 3406 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g230 i0 98.899 4.50865233350813 1907 21 100 0 1 1907 6205 8111 Squirrel monkey retrovirus, complete genome blastn 8598 3406 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
13959105 13959105 PRJNA763243_P_NODE_10771_length_459_cov_13.233161_g10428_i0 PRJNA763243 10771 459 13.233161 60.74020899 root 1 Root_unresolved Root_unresolved 837 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g10428 i0 99.564 15.7930283224401 459 2 100 0 1 459 6678 6220 Moloney murine leukemia virus, complete genome blastn 7249 837 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
13959258 13959258 PRJNA763243_P_NODE_42591_length_270_cov_9.563452_g42245_i0 PRJNA763243 42591 270 9.563452 25.8213204 root 1 Root_unresolved Root_unresolved 499 7.349999999999998e-137   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g42245 i0 100 99.9814814814815 270 0 100 0 1 270 3354 3623 Moloney murine leukemia virus, complete genome blastn 26995 499 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
16508063 16508063 PRJNA763243_P_NODE_2953_length_783_cov_5.819718_g2682_i0 PRJNA763243 2953 783 5.819718 45.56839194 Betaretrovirus 140052 Viruses Viruses 1435 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g2682 i0 99.745 4.19157088122605 783 2 100 0 1 783 5459 6241 Squirrel monkey retrovirus - HLB, complete genome blastn 3282 1435 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
17322112 17322112 PRJNA763243_P_NODE_61994_length_242_cov_1.426036_g61648_i0 PRJNA763243 61994 242 1.426036 3.45100712 Betaretrovirus squmon 3427297 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|1666023499|gb|MK561030.1| 11856 g61648 i0 100 4.00826446280992 242 0 100 0 1 242 2523 2282 Squirrel monkey retrovirus, complete genome blastn 970 448 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
17782796 17782796 PRJNA763243_P_NODE_2534_length_833_cov_7.155263_g2276_i0 PRJNA763243 2534 833 7.155263 59.60334079 Betaretrovirus 140052 Viruses Viruses 1522 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g2276 i0 99.64 3.62304921968787 833 3 100 0 1 833 3921 4753 Squirrel monkey retrovirus - HLB, complete genome blastn 3018 1522 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
20331643 20331643 PRJNA763243_P_NODE_40576_length_275_cov_4.668317_g40230_i0 PRJNA763243 40576 275 4.668317 12.83787175 root 1 Root_unresolved Root_unresolved 499 7.51e-137   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g40230 i0 100 98.4545454545455 270 0 98 0 6 275 2261 1992 Moloney murine leukemia virus, complete genome blastn 27075 499 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
22882878 22882878 PRJNA763243_P_NODE_25218_length_322_cov_6.502008_g24872_i0 PRJNA763243 25218 322 6.502008 20.93646576 Gammaretrovirus 153135 Viruses Viruses 590 5.18e-164   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g24872 i0 99.689 100 322 1 100 0 1 322 3618 3939 Moloney murine leukemia virus, complete genome blastn 32200 590 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
22883058 22883058 PRJNA763243_P_NODE_7078_length_546_cov_4.509514_g6740_i0 PRJNA763243 7078 546 4.509514 24.62194644 Betaretrovirus 140052 Viruses Viruses 909 0   NTclustered gi|1666023499|gb|MK561030.1| 11856 g6740 i0 97.212 3.28388278388278 538 14 99 1 1 538 1081 545 Squirrel monkey retrovirus, complete genome blastn 1793 909 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
24157060 24157060 PRJNA763243_P_NODE_72579_length_208_cov_5.555556_g72233_i0 PRJNA763243 72579 208 5.555556 11.55555648 root 1 Root_unresolved Root_unresolved 379 7.359999999999998e-101   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g72233 i0 99.519 99.375 208 1 100 0 1 208 1719 1512 Moloney murine leukemia virus, complete genome blastn 20670 379 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
25431958 25431958 PRJNA763243_P_NODE_6580_length_562_cov_4.697342_g6248_i0 PRJNA763243 6580 562 4.697342 26.39906204 Gammaretrovirus 153135 Viruses Viruses 1011 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g6248 i0 99.11 99.5427046263345 562 5 100 0 1 562 3960 4521 Moloney murine leukemia virus, complete genome blastn 55943 1011 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;