contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2480626 | 2480626 | PRJNA763243_P_NODE_29442_length_310_cov_3.181435_g29096_i0 | PRJNA763243 | 29442 | 310 | 3.181435 | 9.8624485 | Fusobacterium | 848 | Bacteria | Bacteria | 217 | 9.7e-52 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g29096 | i0 | 100 | 433.622580645161 | 117 | 0 | 84 | 0 | 161 | 277 | 157294 | 157178 | Fusobacterium varium strain SB069 chromosome | blastn | 134423 | 217 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 2480633 | 2480633 | PRJNA763243_P_NODE_30702_length_306_cov_13.433476_g30356_i0 | PRJNA763243 | 30702 | 306 | 13.433476 | 41.10643656 | Fusobacterium | 848 | Bacteria | Bacteria | 540 | 5e-149 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g30356 | i0 | 98.689 | 497.28431372549 | 305 | 3 | 99 | 1 | 1 | 305 | 156820 | 156517 | Fusobacterium varium strain SB069 chromosome | blastn | 152169 | 540 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 3295280 | 3295280 | PRJNA763243_P_NODE_71223_length_214_cov_11.992908_g70877_i0 | PRJNA763243 | 71223 | 214 | 11.992908 | 25.66482312 | Fusobacterium perfoetens | 852 | Bacteria | Bacteria | 357 | 3.5699999999999996e-94 | NTclustered | gi|13447141|gb|AF342857.1| | 852 | g70877 | i0 | 96.744 | 141.579439252336 | 215 | 5 | 99 | 2 | 1 | 213 | 371 | 585 | Fusobacterium perfoetens strain ATCC 29250 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 30298 | 357 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 3756965 | 3756965 | PRJNA763243_P_NODE_37843_length_282_cov_4.645933_g37497_i0 | PRJNA763243 | 37843 | 282 | 4.645933 | 13.10153106 | Fusobacterium | 848 | Bacteria | Bacteria | 516 | 7.67e-142 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g37497 | i0 | 99.645 | 471.18085106383 | 282 | 1 | 100 | 0 | 1 | 282 | 23 | 304 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 132873 | 521 | 0.990403071017274 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 3757110 | 3757110 | PRJNA763243_P_NODE_72883_length_206_cov_69.233083_g72537_i0 | PRJNA763243 | 72883 | 206 | 69.233083 | 142.62015098 | Fusobacterium | 848 | Bacteria | Bacteria | 372 | 1.2199999999999997e-98 | NTclustered | gi|2573686249|gb|CP133474.1| | 851 | g72537 | i0 | 100 | 97.5728155339806 | 201 | 0 | 98 | 0 | 3 | 203 | 1557871 | 1557671 | Fusobacterium nucleatum strain LMG 13131 chromosome, complete genome | blastn | 20100 | 372 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 7121754 | 7121754 | PRJNA763243_P_NODE_28406_length_310_cov_8.105485_g28060_i0 | PRJNA763243 | 28406 | 310 | 8.105485 | 25.1270035 | Fusobacteriaceae bacterium | 2053555 | Bacteria | Bacteria | 324 | 5.56e-84 | NTclustered | gi|2892346784|dbj|AP035781.1| | 2053555 | g28060 | i0 | 85.016 | 341.477419354839 | 307 | 41 | 99 | 4 | 1 | 307 | 3738 | 3437 | Fusobacteriaceae bacterium 9N8 DNA, complete genome | blastn | 105858 | 324 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacteriaceae bacterium | |||
| 7583287 | 7583287 | PRJNA763243_P_NODE_47806_length_259_cov_1.225806_g47460_i0 | PRJNA763243 | 47806 | 259 | 1.225806 | 3.17483754 | Streptobacillus | 34104 | Bacteria | Bacteria | 222 | 1.6999999999999998e-53 | NTclustered | gi|470485174|ref|NR_076688.1| | 34105 | g47460 | i0 | 85.446 | 363.583011583012 | 213 | 31 | 82 | 0 | 28 | 240 | 2230 | 2018 | Streptobacillus moniliformis strain DSM 12112 23S ribosomal RNA gene, complete sequence | blastn | 94168 | 222 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Streptobacillus | Streptobacillus moniliformis | ||
| 14772193 | 14772193 | PRJNA763243_P_NODE_39772_length_277_cov_4.450980_g39426_i0 | PRJNA763243 | 39772 | 277 | 4.45098 | 12.3292146 | uncultured Propionigenium sp. | 259317 | Bacteria | Bacteria | 357 | 4.82e-94 | NTclustered | gi|453201797|gb|JQ999705.1| | 259317 | g39426 | i0 | 90 | 453.216606498195 | 280 | 23 | 100 | 4 | 1 | 277 | 419 | 142 | Uncultured Propionigenium sp. clone GKJWQY101AW14Z 23S ribosomal RNA gene, partial sequence | blastn | 125541 | 357 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Propionigenium | uncultured Propionigenium sp. | ||
| 17322184 | 17322184 | PRJNA763243_P_NODE_65474_length_236_cov_6.220859_g65128_i0 | PRJNA763243 | 65474 | 236 | 6.220859 | 14.68122724 | Fusobacteria bacterium ZRK30 | 2970471 | Bacteria | Bacteria | 132 | 2.64e-26 | NTclustered | gi|2284595238|gb|CP102405.1| | 2970471 | g65128 | i0 | 78.166 | 57.3347457627119 | 229 | 35 | 95 | 14 | 10 | 234 | 497541 | 497758 | Fusobacteria bacterium ZRK30 chromosome 2, complete sequence | blastn | 13531 | 132 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteria bacterium ZRK30 | ||||||
| 17782800 | 17782800 | PRJNA763243_P_NODE_26594_length_315_cov_8.855372_g26248_i0 | PRJNA763243 | 26594 | 315 | 8.855372 | 27.8944218 | Fusobacterium | 848 | Bacteria | Bacteria | 507 | 5.24e-139 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g26248 | i0 | 96.721 | 498.8 | 305 | 9 | 97 | 1 | 4 | 308 | 337297 | 337600 | Fusobacterium varium strain SB069 chromosome | blastn | 157122 | 512 | 0.990234375 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 18594730 | 18594730 | PRJNA763243_P_NODE_3155_length_760_cov_5.828239_g2879_i0 | PRJNA763243 | 3155 | 760 | 5.828239 | 44.2946164 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 1173 | 0 | NTclustered | gi|2706501641|gb|CP084157.1| | 76857 | g2879 | i0 | 94.723 | 488.186842105263 | 758 | 35 | 99 | 5 | 1 | 757 | 435216 | 434463 | Fusobacterium polymorphum strain KCOM2446 chromosome, complete genome | blastn | 371022 | 1173 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 19870701 | 19870701 | PRJNA763243_P_NODE_66096_length_234_cov_13.273292_g65750_i0 | PRJNA763243 | 66096 | 234 | 13.273292 | 31.05950328 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 429 | 8.289999999999998e-116 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g65750 | i0 | 100 | 332.730769230769 | 232 | 0 | 99 | 0 | 1 | 232 | 1624332 | 1624563 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 77859 | 429 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 21146481 | 21146481 | PRJNA763243_P_NODE_67837_length_229_cov_2.205128_g67491_i0 | PRJNA763243 | 67837 | 229 | 2.205128 | 5.04974312 | uncultured Ilyobacter sp. | 544433 | Bacteria | Bacteria | 233 | 6.799999999999999e-57 | NTclustered | gi|2621717559|emb|OY775911.1| | 544433 | g67491 | i0 | 85.59 | 464.318777292576 | 229 | 25 | 98 | 5 | 5 | 229 | 1909924 | 1910148 | MAG: uncultured Ilyobacter sp. isolate 988a6a11-b556-497a-8909-2adea115d691 genome assembly, chromosome: 1 | blastn | 106329 | 233 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Ilyobacter | uncultured Ilyobacter sp. | ||
| 24969971 | 24969971 | PRJNA763243_P_NODE_43440_length_268_cov_18.051282_g43094_i0 | PRJNA763243 | 43440 | 268 | 18.051282 | 48.37743576 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 412 | 9.77e-111 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g43094 | i0 | 94.717 | 415.514925373134 | 265 | 14 | 99 | 0 | 1 | 265 | 53073 | 52809 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 111358 | 412 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;