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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA763243" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 17 ✖

bioproject 1

  • PRJNA763243 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205041 1205041 PRJNA763243_P_NODE_18581_length_364_cov_19.316151_g18236_i0 PRJNA763243 18581 364 19.316151 70.31078964 Eukaryota 2759 Plants Plants 656 0   NTclustered gi|1898545223|gb|MT951391.1| 3078 g18236 i0 99.446 99.1401098901099 361 2 99 0 4 364 1255 1615 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 36087 656 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
4571747 4571747 PRJNA763243_P_NODE_44324_length_266_cov_4.393782_g43978_i0 PRJNA763243 44324 266 4.393782 11.68746012 Blidingia sp. DT1 2022611 Plants Plants 363 9.889999999999997e-96   NTclustered gi|1220117795|gb|KY401415.1| 2022611 g43978 i0 91.923 98.3496240601504 260 19 97 2 5 263 274 16 Blidingia sp. DT1 28S ribosomal RNA gene, partial sequence blastn 26161 363 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Blidingia Blidingia sp. DT1
6309278 6309278 PRJNA763243_P_NODE_37745_length_282_cov_84.569378_g37399_i0 PRJNA763243 37745 282 84.569378 238.48564596 Eukaryota 2759 Plants Plants 496 1e-135   NTclustered gi|1201359270|gb|MF040792.1| 3078 g37399 i0 98.925 98.936170212766 279 0 98 1 4 279 53 331 Auxenochlorella pyrenoidosa isolate HIT9 18S ribosomal RNA gene, partial sequence blastn 27900 496 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
7122595 7122595 PRJNA763243_P_NODE_65386_length_236_cov_39.312883_g65040_i0 PRJNA763243 65386 236 39.312883 92.77840388 Desmochloris halophila 138176 Plants Plants 412 8.43e-111   NTclustered gi|371782086|emb|HE610118.1| 138176 g65040 i0 99.127 94.7966101694915 229 2 97 0 4 232 2334 2562 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 22372 412 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
12222385 12222385 PRJNA763243_P_NODE_1710_length_977_cov_12.902655_g1500_i0 PRJNA763243 1710 977 12.902655 126.05893935 Stigeoclonium helveticum 55999 Plants Plants 65.8 1.27e-5   NTclustered gi|162134275|gb|EU123958.1| 55999 g1500 i0 97.368 0.230296827021494 38 1 4 0 7 44 1858 1821 Stigeoclonium helveticum strain UTEX 441 small-subunit ribosomal RNA (rns) gene, complete sequence; mitochondrial blastn 225 65.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetophorales Chaetophoraceae Stigeoclonium Stigeoclonium helveticum
12684865 12684865 PRJNA763243_P_NODE_29690_length_310_cov_2.481013_g29344_i0 PRJNA763243 29690 310 2.481013 7.6911403 Pseudendoclonium 43938 Plants Plants 272 2.04e-68   NTclustered gi|50507928|dbj|AB183573.1| 284945 g29344 i0 100 93.2516129032258 147 0 94 0 161 307 2217 2071 Filamentous ulvophyte sp. MBIC10030 gene for 18S rRNA, partial sequence, strain: MBIC10030 blastn 28908 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae       Ulvophyceae sp. MBIC10030
13497436 13497436 PRJNA763243_P_NODE_58031_length_245_cov_4.645349_g57685_i0 PRJNA763243 58031 245 4.645349 11.38110505 uncultured Apatococcus 1229086 Plants Plants 429 8.739999999999998e-116   NTclustered gi|1031961068|gb|KX025109.1| 1229086 g57685 i0 100 92.3632653061224 232 0 95 0 11 242 1521 1290 Uncultured Apatococcus clone GOGs_K08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 22629 429 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Apatococcus
13497844 13497844 PRJNA763243_P_NODE_74231_length_201_cov_4.992188_g73885_i0 PRJNA763243 74231 201 4.992188 10.03429788 Chlorella variabilis 554065 Plants Plants 121 4.7199999999999996e-23   NTclustered gi|552831009|ref|XM_005847974.1| 554065 g73885 i0 91.86 7.01990049751244 86 7 43 0 102 187 682 767 Chlorella variabilis hypothetical protein (CHLNCDRAFT_145209) mRNA, complete cds blastn 1411 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
16046006 16046006 PRJNA763243_P_NODE_43213_length_269_cov_1.775510_g42867_i0 PRJNA763243 43213 269 1.77551 4.7761219 Pleurastrum terricola 34116 Plants Plants 460 3.45e-125   NTclustered gi|153805558|ref|NC_009681.1| 34116 g42867 i0 99.605 116.24907063197 253 0 94 1 14 266 428 177 Leptosira terrestris chloroplast, complete genome blastn 31271 460 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum terricola
17322137 17322137 PRJNA763243_P_NODE_63374_length_241_cov_1.339286_g63028_i0 PRJNA763243 63374 241 1.339286 3.22767926 Volvox carteri 3067 Plants Plants 167 7.429999999999999e-37   NTclustered gi|302837497|ref|XM_002950262.1| 3068 g63028 i0 80.087 44.3983402489627 231 40 95 6 3 230 964 737 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_81049), partial mRNA blastn 10700 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
17782851 17782851 PRJNA763243_P_NODE_37154_length_284_cov_2.952607_g36808_i0 PRJNA763243 37154 284 2.952607 8.38540388 Bryopsis 3128 Plants Plants 348 2.99e-91   NTclustered gi|969822372|gb|KT950953.1| 3129 g36808 i0 88.968 94.9964788732394 281 31 99 0 1 281 674 394 Bryopsis maxima actin gene, partial cds blastn 26979 348 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis maxima
17782944 17782944 PRJNA763243_P_NODE_65774_length_235_cov_10.098765_g65428_i0 PRJNA763243 65774 235 10.098765 23.73209775 Myrmecia 13617 Plants Plants 409 1.08e-109   NTclustered gi|168144|gb|M62995.1|FRIUGEAA 3171 g65428 i0 98.696 97.3574468085106 230 3 98 0 4 233 640 869 Friedmannia israeliensis 18S ribosomal RNA gene blastn 22879 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis
21146497 21146497 PRJNA763243_P_NODE_68717_length_226_cov_4.581699_g68371_i0 PRJNA763243 68717 226 4.581699 10.35463974 Auxenochlorella pyrenoidosa 3078 Plants Plants 401 1.7299999999999993e-107   NTclustered gi|1201359271|gb|MF040793.1| 3078 g68371 i0 99.545 97.287610619469 220 1 97 0 1 220 1695 1476 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 21987 401 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
21607292 21607292 PRJNA763243_P_NODE_15197_length_395_cov_9.583851_g14852_i0 PRJNA763243 15197 395 9.583851 37.856211450000004 Desmochloris 138596 Plants Plants 689 0   NTclustered gi|313476264|emb|FM882217.1| 578869 g14852 i0 98.465 99.0075949367089 391 6 99 0 4 394 572 962 Desmochloris sp. TP-2008 partial 18S rRNA gene, ITS1, 5.8S rRNA and ITS2, strain CCAP 6006/2 blastn 39108 689 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris mollenhaueri
22882887 22882887 PRJNA763243_P_NODE_27298_length_312_cov_3.577406_g26952_i0 PRJNA763243 27298 312 3.577406 11.16150672 Viridiplantae 33090 Plants Plants 132 3.64e-26   NTclustered gi|1847694119|ref|NC_048526.1| 3133 g26952 i0 87.179 60.1314102564103 117 14 37 1 35 150 41081 41197 Codium fragile mitochondrion, complete genome blastn 18761 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Codiaceae Codium Codium fragile
23696303 23696303 PRJNA763243_P_NODE_42359_length_271_cov_1.555556_g42013_i0 PRJNA763243 42359 271 1.555556 4.21555676 Pediastrum duplex 3105 Plants Plants 315 2.87e-81   NTclustered gi|21040380|gb|AF183479.2| 3105 g42013 i0 95.025 90.3874538745387 201 9 96 1 72 271 3138 2938 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 24495 315 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
25431747 25431747 PRJNA763243_P_NODE_12500_length_430_cov_12.198880_g12155_i0 PRJNA763243 12500 430 12.19888 52.455184 Eukaryota 2759 Plants Plants 773 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g12155 i0 99.297 95.9906976744186 427 3 99 0 4 430 517 91 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 41276 773 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;