RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7582993 7582993 PRJNA760976_P_NODE_14706_length_389_cov_1.155063_g14386_i0 PRJNA760976 14706 389 1.155063 4.49319507 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 244 5.71e-60   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g14386 i0 82.624 70.8097686375321 282 43 72 5 1 279 156 434 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 27545 246 0.991869918699187 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
9670799 9670799 PRJNA760976_P_NODE_3548_length_692_cov_2.819063_g3245_i0 PRJNA760976 3548 692 2.819063 19.50791596 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 379 2.79e-100   NTclustered gi|294890662|ref|XM_002773206.1| 423536 g3245 i0 77.108 73.4609826589595 664 147 96 5 32 692 693 32 Perkinsus marinus ATCC 50983 60S ribosomal protein L10A-2, putative, mRNA blastn 50835 379 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;