RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA760976 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5033310 5033310 PRJNA760976_P_NODE_51944_length_245_cov_0.895349_g51623_i0 PRJNA760976 51944 245 0.895349 2.19360505 Metazoa 33208 Mollusca Mollusca 56.5 0.002   NTclustered gi|1897945107|ref|XM_035973584.1| 6500 g51623 i0 100 8.03265306122449 30 0 12 0 59 88 856 885 PREDICTED: Aplysia californica nuclear receptor corepressor 2 (LOC101853904), partial mRNA blastn 1968 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
13496080 13496080 PRJNA760976_P_NODE_16451_length_373_cov_2.630000_g16130_i0 PRJNA760976 16451 373 2.63 9.8099 Gigantopelta aegis 1735272 Mollusca Mollusca 113 1.6e-20   NTclustered gi|2034271035|ref|XR_005960499.1| 1735272 g16130 i0 79.096 7.2627345844504 177 27 47 8 192 365 3686 3517 PREDICTED: Gigantopelta aegis large subunit ribosomal RNA (LOC121392465), rRNA blastn 2709 113 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
19056780 19056780 PRJNA760976_P_NODE_38395_length_276_cov_1.408867_g38074_i0 PRJNA760976 38395 276 1.408867 3.88847292 Metazoa 33208 Mollusca Mollusca 152 2.43e-32   NTclustered gi|449139007|gb|KC161208.1| 36095 g38074 i0 87.692 50.8949275362319 130 16 47 0 122 251 266 137 Haliotis diversicolor heat shock protein 90 mRNA, complete cds blastn 14047 152 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis diversicolor
22419643 22419643 PRJNA760976_P_NODE_25898_length_319_cov_0.841463_g25577_i0 PRJNA760976 25898 319 0.841463 2.68426697 Pomacea canaliculata 400727 Mollusca Mollusca 58.4 6.43e-4   NTclustered gi|1397715626|ref|XM_025249024.1| 400727 g25577 i0 100 12.1065830721003 31 0 10 0 234 264 4023 4053 PREDICTED: Pomacea canaliculata homeobox protein otx5-A-like (LOC112570536), transcript variant X4, mRNA blastn 3862 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
23695282 23695282 PRJNA760976_P_NODE_24899_length_323_cov_1.392000_g24578_i0 PRJNA760976 24899 323 1.392 4.49616 Mizuhopecten yessoensis 6573 Mollusca Mollusca 174 6.2e-39   NTclustered gi|1207980183|ref|XM_021483941.1| 6573 g24578 i0 78.598 1.80185758513932 271 52 83 4 40 306 395 127 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L3-B-like (LOC110440810), mRNA blastn 582 174 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;