RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3756756 3756756 PRJNA760976_P_NODE_34763_length_286_cov_2.211268_g34442_i0 PRJNA760976 34763 286 2.211268 6.32422648 Physarum 5790 Evosea other_Eukaryota 246 1.13e-60   NTclustered gi|478735555|gb|KC473816.1| 1158133 g34442 i0 82.332 95.5909090909091 283 50 99 0 4 286 124 406 Physarum sp. MVO-2012 isolate LE 255712 elongation factor 1-alpha (tef1) gene, partial cds blastn 27339 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
5846028 5846028 PRJNA760976_P_NODE_6265_length_540_cov_1.128480_g5949_i0 PRJNA760976 6265 540 1.12848 6.093792 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 610 6.98e-170   NTclustered gi|167859711|gb|EU273435.1| 1346289 g5949 i0 87.037 100.874074074074 540 70 100 0 1 540 697 158 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 54472 610 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
6309085 6309085 PRJNA760976_P_NODE_8865_length_471_cov_1.097990_g8546_i0 PRJNA760976 8865 471 1.09799 5.1715329 Diderma 289935 Evosea other_Eukaryota 348 5.220000000000001e-91   NTclustered gi|2785094397|gb|PP178614.1| 289974 g8546 i0 83.777 77.9044585987261 376 51 79 7 54 424 441 71 Diderma radiatum voucher HMJAU M10164-1 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 36693 348 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma radiatum
7121161 7121161 PRJNA760976_P_NODE_49286_length_248_cov_2.565714_g48965_i0 PRJNA760976 49286 248 2.565714 6.36297072 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|66811303|ref|XM_634268.1| 352472 g48965 i0 100 1.81451612903226 30 0 12 0 143 172 3569 3598 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0282851) mRNA, complete cds blastn 450 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
9670876 9670876 PRJNA760976_P_NODE_7668_length_498_cov_1.251765_g7349_i0 PRJNA760976 7668 498 1.251765 6.2337897 Heterostelium album 2086695 Evosea other_Eukaryota 390 9.080000000000001e-104   NTclustered gi|1160574132|ref|XM_020577244.1| 670386 g7349 i0 81.224 97.8333333333333 490 86 98 6 12 498 987 501 Polysphondylium pallidum PN500 actin (act10), partial mRNA blastn 48721 390 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
21144893 21144893 PRJNA760976_P_NODE_23577_length_329_cov_1.406250_g23256_i0 PRJNA760976 23577 329 1.40625 4.6265625 Physarum licheniforme 2116612 Evosea other_Eukaryota 289 2.17e-73   NTclustered gi|2049856367|gb|MG963525.1| 2116612 g23256 i0 82.675 96.9756838905775 329 53 99 4 3 329 200 526 Physarum licheniforme strain MA-Fungi 91207 elongation factor 1A (EF1a) gene, partial cds blastn 31905 289 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum licheniforme
24968970 24968970 PRJNA760976_P_NODE_35220_length_285_cov_1.400943_g34899_i0 PRJNA760976 35220 285 1.400943 3.99268755 Heterostelium album 2086695 Evosea other_Eukaryota 224 5.269999999999999e-54   NTclustered gi|1160552074|ref|XM_020571371.1| 670386 g34899 i0 81.786 10.0070175438596 280 39 96 11 1 274 5 278 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 2852 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;