RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA760976 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1204913 1204913 PRJNA760976_P_NODE_56401_length_241_cov_0.898810_g56080_i0 PRJNA760976 56401 241 0.89881 2.1661321 Metazoa 33208 Cnidaria other_Eukaryota 60.2 1.3e-4   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g56080 i0 97.143 1.85477178423237 35 1 15 0 59 93 26358902 26358868 Anemonia sulcata genome assembly, chromosome: 1 blastn 447 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12684679 12684679 PRJNA760976_P_NODE_11790_length_422_cov_2.223496_g11470_i0 PRJNA760976 11790 422 2.223496 9.38315312 Hydrozoa 6074 Cnidaria other_Eukaryota 324 7.7999999999999995e-84   NTclustered gi|2519007092|ref|XM_057455329.1| 13093 g11470 i0 81.436 99.1232227488152 404 67 95 7 23 422 3628 3229 PREDICTED: Hydractinia symbiolongicarpus kelch-like protein 20 (LOC130649111), mRNA blastn 41830 326 0.993865030674847 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
21144894 21144894 PRJNA760976_P_NODE_23837_length_328_cov_1.156863_g23516_i0 PRJNA760976 23837 328 1.156863 3.79451064 Salacia desmoides 662031 Cnidaria other_Eukaryota 154 8.22e-33   NTclustered gi|256674477|gb|FJ550381.1| 662031 g23516 i0 84.615 24.4878048780488 156 22 48 2 1 156 1513 1666 Salacia desmoides 28S ribosomal RNA gene, partial sequence blastn 8032 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Sertulariidae Salacia Salacia desmoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;