RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 10 ✖

bioproject 1

  • PRJNA760976 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742326 742326 PRJNA760976_P_NODE_2301_length_841_cov_2.235677_g2026_i0 PRJNA760976 2301 841 2.235677 18.80204357 Zebrafish picornavirus 1 2304617 Viruses Viruses 1452 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2026 i0 97.86 3.00118906064209 841 16 100 1 1 841 127 965 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2524 1452 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2018386 2018386 PRJNA760976_P_NODE_3482_length_698_cov_2.305600_g3179_i0 PRJNA760976 3482 698 2.3056 16.093088 brine shrimp arlivirus 7 2900382 Viruses Viruses 1190 0   NTclustered gi|2209095168|gb|OL472412.1| 2900382 g3179 i0 97.071 1.02722063037249 717 2 100 2 1 698 4125 4841 MAG: Brine shrimp arlivirus 7 isolate XZ/98-19 hypothetical protein, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 717 1190 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 7
5845881 5845881 PRJNA760976_P_NODE_1605_length_989_cov_1.907205_g1369_i0 PRJNA760976 1605 989 1.907205 18.86225745 Zebrafish picornavirus 1 2304617 Viruses Viruses 1574 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g1369 i0 95.363 3.00910010111223 992 43 100 1 1 989 2458 3449 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 2976 1574 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9670872 9670872 PRJNA760976_P_NODE_588_length_1530_cov_2.117364_g472_i0 PRJNA760976 588 1530 2.117364 32.3956692 Zebrafish picornavirus 1 2304617 Viruses Viruses 2599 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g472 i0 97.32 3 1530 41 100 0 1 1530 5049 3520 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 4590 2599 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
16045055 16045055 PRJNA760976_P_NODE_52373_length_245_cov_0.860465_g52052_i0 PRJNA760976 52373 245 0.860465 2.10813925 brine shrimp yue-like virus 9 2900461 Viruses Viruses 448 2.41e-121   NTclustered gi|2209095304|gb|OL472858.1| 2900461 g52052 i0 99.592 2 245 1 100 0 1 245 7332 7088 MAG: Brine shrimp yue-like virus 9 isolate XZ/98-19 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 490 448 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
17320678 17320678 PRJNA760976_P_NODE_29694_length_303_cov_1.991304_g29373_i0 PRJNA760976 29694 303 1.991304 6.03365112 Dicistroviridae sp. 1955144 Viruses Viruses 560 3.79e-155   NTclustered gi|2756423162|gb|PP745372.1| 1955144 g29373 i0 100 2 303 0 100 0 1 303 1943 1641 MAG: Dicistroviridae sp. isolate 037_370 genomic sequence blastn 606 560 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
17320788 17320788 PRJNA760976_P_NODE_874_length_1299_cov_4.314029_g714_i0 PRJNA760976 874 1299 4.314029 56.03923671 Zebrafish picornavirus 1 2304617 Viruses Viruses 1962 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g714 i0 96.769 3.5927636643572 1176 38 99 0 124 1299 8214 7039 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 4667 1962 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
21144936 21144936 PRJNA760976_P_NODE_357_length_1863_cov_2.587151_g280_i0 PRJNA760976 357 1863 2.587151 48.19862313 Zebrafish picornavirus 1 2304617 Viruses Viruses 3090 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g280 i0 96.617 2.99838969404187 1862 63 99 0 1 1862 7082 5221 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 5586 3090 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24968945 24968945 PRJNA760976_P_NODE_2280_length_844_cov_1.501946_g2007_i0 PRJNA760976 2280 844 1.501946 12.67642424 Zebrafish picornavirus 1 2304617 Viruses Viruses 1384 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2007 i0 96.318 2.99289099526066 842 31 99 0 1 842 1352 2193 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2526 1384 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24969028 24969028 PRJNA760976_P_NODE_53980_length_243_cov_0.905882_g53659_i0 PRJNA760976 53980 243 0.905882 2.20129326 brine shrimp arlivirus 7 2900382 Viruses Viruses 433 6.69e-117   NTclustered gi|2209095168|gb|OL472412.1| 2900382 g53659 i0 98.765 1 243 3 100 0 1 243 3892 4134 MAG: Brine shrimp arlivirus 7 isolate XZ/98-19 hypothetical protein, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 243 433 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 7

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;