contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 742458 | 742458 | PRJNA760976_P_NODE_641_length_1464_cov_12.931704_g514_i0 | PRJNA760976 | 641 | 1464 | 12.931704 | 189.32014656 | Coprobacter fastidiosus | 1099853 | Bacteria | Bacteria | 152 | 1.44e-31 | NTclustered | gi|2487365010|dbj|AP028032.1| | 1099853 | g514 | i0 | 83.529 | 21.4883879781421 | 170 | 21 | 11 | 7 | 786 | 951 | 1036626 | 1036792 | Coprobacter fastidiosus JCM 33896 DNA, complete genome | blastn | 31459 | 152 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Barnesiellaceae | Coprobacter | Coprobacter fastidiosus | |
| 1204895 | 1204895 | PRJNA760976_P_NODE_20921_length_343_cov_3.540741_g20600_i0 | PRJNA760976 | 20921 | 343 | 3.540741 | 12.14474163 | Haliscomenobacter | 2349 | Bacteria | Bacteria | 569 | 7.239999999999998e-158 | NTclustered | gi|470488547|ref|NR_076877.1| | 2350 | g20600 | i0 | 97.313 | 380.084548104956 | 335 | 9 | 98 | 0 | 7 | 341 | 2665 | 2331 | Haliscomenobacter hydrossis strain DSM 1100 23S ribosomal RNA gene, complete sequence | blastn | 130369 | 569 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Haliscomenobacteraceae | Haliscomenobacter | Haliscomenobacter hydrossis | |
| 2480442 | 2480442 | PRJNA760976_P_NODE_102_length_3019_cov_32.894094_g77_i0 | PRJNA760976 | 102 | 3019 | 32.894094 | 993.07269786 | Bacteroidales | 171549 | Bacteria | Bacteria | 130 | 1.41e-24 | NTclustered | gi|470487156|ref|NR_076804.1| | 185300 | g77 | i0 | 81.818 | 9.37263994700232 | 154 | 28 | 5 | 0 | 2344 | 2497 | 853 | 700 | Paludibacter propionicigenes strain WB4 23S ribosomal RNA gene, complete sequence | blastn | 28296 | 130 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Paludibacteraceae | Paludibacter | Paludibacter propionicigenes | |
| 3756735 | 3756735 | PRJNA760976_P_NODE_10343_length_443_cov_2.045946_g10024_i0 | PRJNA760976 | 10343 | 443 | 2.045946 | 9.06354078 | Haliscomenobacter | 2349 | Bacteria | Bacteria | 329 | 1.77e-85 | NTclustered | gi|470488547|ref|NR_076877.1| | 2350 | g10024 | i0 | 81.931 | 213.2460496614 | 404 | 59 | 90 | 13 | 47 | 443 | 1336 | 940 | Haliscomenobacter hydrossis strain DSM 1100 23S ribosomal RNA gene, complete sequence | blastn | 94468 | 329 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Haliscomenobacteraceae | Haliscomenobacter | Haliscomenobacter hydrossis | |
| 5033283 | 5033283 | PRJNA760976_P_NODE_144_length_2601_cov_21.631329_g109_i0 | PRJNA760976 | 144 | 2601 | 21.631329 | 562.63086729 | Candidatus Cardinium | 273135 | Bacteria | Bacteria | 63.9 | 1.25e-4 | NTclustered | gi|1393535634|gb|CP029619.1| | 247481 | g109 | i0 | 83.099 | 0.163783160322953 | 71 | 10 | 3 | 2 | 1627 | 1696 | 685277 | 685208 | Candidatus Cardinium hertigii strain cHgTN10 chromosome, complete genome | blastn | 426 | 63.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Amoebophilaceae | Candidatus Cardinium | Candidatus Cardinium hertigii | |
| 5845938 | 5845938 | PRJNA760976_P_NODE_37365_length_279_cov_1.121359_g37044_i0 | PRJNA760976 | 37365 | 279 | 1.121359 | 3.12859161 | Flavobacterium faecale | 1355330 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|1384922047|gb|CP020918.1| | 1355330 | g37044 | i0 | 100 | 0.103942652329749 | 29 | 0 | 10 | 0 | 2 | 30 | 2665497 | 2665525 | Flavobacterium faecale strain WV33 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium faecale | |
| 7121071 | 7121071 | PRJNA760976_P_NODE_19246_length_353_cov_2.075000_g18925_i0 | PRJNA760976 | 19246 | 353 | 2.075 | 7.32475 | Flavobacterium sp. N2270 | 2986831 | Bacteria | Bacteria | 564 | 3.47e-156 | NTclustered | gi|2324023718|gb|CP110005.1| | 2986831 | g18925 | i0 | 96.264 | 536.912181303116 | 348 | 5 | 97 | 5 | 1 | 344 | 292069 | 291726 | Flavobacterium sp. N2270 chromosome, complete genome | blastn | 189530 | 564 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. N2270 | |
| 7121147 | 7121147 | PRJNA760976_P_NODE_46646_length_254_cov_1.381215_g46325_i0 | PRJNA760976 | 46646 | 254 | 1.381215 | 3.5082861 | Flavobacterium channae | 2897181 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|2164478757|gb|CP089096.1| | 2897181 | g46325 | i0 | 100 | 480.751968503937 | 254 | 0 | 100 | 0 | 1 | 254 | 486934 | 487187 | Flavobacterium channae strain KSM-R2A30 chromosome, complete genome | blastn | 122111 | 470 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium channae | |
| 9670786 | 9670786 | PRJNA760976_P_NODE_30928_length_299_cov_1.327434_g30607_i0 | PRJNA760976 | 30928 | 299 | 1.327434 | 3.96902766 | Chryseobacterium indologenes | 253 | Bacteria | Bacteria | 531 | 2.9299999999999992e-146 | NTclustered | gi|2463614404|gb|CP120209.1| | 253 | g30607 | i0 | 98.662 | 482 | 299 | 4 | 100 | 0 | 1 | 299 | 3063642 | 3063940 | Chryseobacterium indologenes strain Ery-6B chromosome, complete genome | blastn | 144118 | 531 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 12221959 | 12221959 | PRJNA760976_P_NODE_17650_length_364_cov_1.398625_g17329_i0 | PRJNA760976 | 17650 | 364 | 1.398625 | 5.090995 | Tenuifilaceae bacterium CYCD | 3026384 | Bacteria | Bacteria | 228 | 5.3499999999999984e-55 | NTclustered | gi|2599609338|dbj|AP027304.1| | 3026384 | g17329 | i0 | 81.625 | 187.741758241758 | 283 | 45 | 77 | 7 | 65 | 343 | 715300 | 715021 | Tenuifilaceae bacterium CYCD DNA, complete genome | blastn | 68338 | 228 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tenuifilaceae | Tenuifilaceae bacterium CYCD | ||
| 12222037 | 12222037 | PRJNA760976_P_NODE_43710_length_261_cov_2.393617_g43389_i0 | PRJNA760976 | 43710 | 261 | 2.393617 | 6.24734037 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 110 | 1.39e-19 | NTclustered | gi|2621700911|emb|OY759745.1| | 2030927 | g43389 | i0 | 74.905 | 59.2183908045977 | 263 | 54 | 99 | 10 | 2 | 260 | 637278 | 637532 | MAG: Bacteroidales bacterium isolate 6557e7a1-78fa-4815-bf71-3c9d2683966d genome assembly, chromosome: 1 | blastn | 15456 | 110 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 15233518 | 15233518 | PRJNA760976_P_NODE_20232_length_347_cov_2.448905_g19911_i0 | PRJNA760976 | 20232 | 347 | 2.448905 | 8.49770035 | Emticicia | 312278 | Bacteria | Bacteria | 520 | 7.4899999999999985e-143 | NTclustered | gi|470489174|ref|NR_076911.1| | 312279 | g19911 | i0 | 93.66 | 237.763688760807 | 347 | 22 | 100 | 0 | 1 | 347 | 364 | 18 | Emticicia oligotrophica strain GPTSA100-15 23S ribosomal RNA gene, complete sequence | blastn | 82504 | 520 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Leadbetterellaceae | Emticicia | Emticicia oligotrophica | |
| 17320634 | 17320634 | PRJNA760976_P_NODE_16214_length_375_cov_3.228477_g15893_i0 | PRJNA760976 | 16214 | 375 | 3.228477 | 12.10678875 | Spirosoma rhododendri | 2728024 | Bacteria | Bacteria | 250 | 1.18e-61 | NTclustered | gi|1835007590|gb|CP051677.1| | 2728024 | g15893 | i0 | 92.09 | 165.416 | 177 | 14 | 48 | 0 | 196 | 372 | 1502120 | 1502296 | Spirosoma sp. CJU-R4 chromosome, complete genome | blastn | 62031 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma rhododendri | |
| 17320716 | 17320716 | PRJNA760976_P_NODE_41054_length_268_cov_2.851282_g40733_i0 | PRJNA760976 | 41054 | 268 | 2.851282 | 7.64143576 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 333 | 7.82e-87 | NTclustered | gi|2621784978|emb|OY781436.1| | 2030927 | g40733 | i0 | 89.655 | 268.690298507463 | 261 | 27 | 97 | 0 | 5 | 265 | 884061 | 884321 | MAG: Bacteroidales bacterium isolate 341beb75-fe78-4792-8f66-49c0517f62f9 genome assembly, chromosome: 1 | blastn | 72009 | 333 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 19056784 | 19056784 | PRJNA760976_P_NODE_44075_length_260_cov_2.994652_g43754_i0 | PRJNA760976 | 44075 | 260 | 2.994652 | 7.7860952 | Pedobacter | 84567 | Bacteria | Bacteria | 375 | 1.2399999999999995e-99 | NTclustered | gi|1821195603|gb|CP049868.1| | 2714940 | g43754 | i0 | 95.359 | 274.088461538462 | 237 | 9 | 100 | 2 | 25 | 260 | 1870501 | 1870736 | Pedobacter sp. HDW13 chromosome, complete genome | blastn | 71263 | 375 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. HDW13 | |
| 19869192 | 19869192 | PRJNA760976_P_NODE_11076_length_432_cov_2.445682_g10756_i0 | PRJNA760976 | 11076 | 432 | 2.445682 | 10.56534624 | Chryseobacterium indologenes | 253 | Bacteria | Bacteria | 741 | 0 | NTclustered | gi|2463614404|gb|CP120209.1| | 253 | g10756 | i0 | 98.118 | 520.782407407407 | 425 | 8 | 98 | 0 | 1 | 425 | 3062374 | 3062798 | Chryseobacterium indologenes strain Ery-6B chromosome, complete genome | blastn | 224978 | 741 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 21144969 | 21144969 | PRJNA760976_P_NODE_48597_length_250_cov_0.870056_g48276_i0 | PRJNA760976 | 48597 | 250 | 0.870056 | 2.17514 | Runella sp. SP2 | 2268026 | Bacteria | Bacteria | 449 | 6.87e-122 | NTclustered | gi|1509191025|gb|CP031030.1| | 2268026 | g48276 | i0 | 99.197 | 306.628 | 249 | 2 | 99 | 0 | 2 | 250 | 7121885 | 7121637 | Runella sp. SP2 chromosome, complete genome | blastn | 76657 | 449 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Runella | Runella sp. SP2 | |
| 22882743 | 22882743 | PRJNA760976_P_NODE_898_length_1287_cov_2.655684_g736_i0 | PRJNA760976 | 898 | 1287 | 2.655684 | 34.17865308 | Emticicia | 312278 | Bacteria | Bacteria | 2076 | 0 | NTclustered | gi|470489174|ref|NR_076911.1| | 312279 | g736 | i0 | 95.807 | 315.214452214452 | 1288 | 51 | 100 | 3 | 1 | 1287 | 1660 | 375 | Emticicia oligotrophica strain GPTSA100-15 23S ribosomal RNA gene, complete sequence | blastn | 405681 | 2076 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Leadbetterellaceae | Emticicia | Emticicia oligotrophica | |
| 23695386 | 23695386 | PRJNA760976_P_NODE_6419_length_534_cov_1.236443_g6102_i0 | PRJNA760976 | 6419 | 534 | 1.236443 | 6.60260562 | Candidatus Shikimatogenerans sp. Tduv | 3158567 | Bacteria | Bacteria | 80.5 | 2.41e-10 | NTclustered | gi|2859865482|gb|CP157894.2| | 3158567 | g6102 | i0 | 86.667 | 15.4906367041199 | 75 | 7 | 14 | 2 | 229 | 303 | 8241 | 8312 | MAG: Candidatus Shikimatogenerans sp. Tduv chromosome | blastn | 8272 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Candidatus Shikimatogenerans | Candidatus Shikimatogenerans sp. Tduv |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;