RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 10 ✖

bioproject 1

  • PRJNA760976 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3293659 3293659 PRJNA760976_P_NODE_39963_length_271_cov_2.262626_g39642_i0 PRJNA760976 39963 271 2.262626 6.13171646 Jakoba libera 143017 Root_unresolved Root_unresolved 106 1.88e-18   NTclustered gi|501595239|ref|NC_021127.1| 143017 g39642 i0 77.528 1.30258302583026 178 38 65 2 94 270 92317 92493 Jakoba libera strain ATCC 50422 mitochondrion, complete genome blastn 353 106 1 Eukaryota Discoba       Jakobida Jakobidae Jakoba Jakoba libera
5846002 5846002 PRJNA760976_P_NODE_53965_length_243_cov_0.905882_g53644_i0 PRJNA760976 53965 243 0.905882 2.20129326 Eutreptiella pomquetensis 215699 Euglenozoa other_Eukaryota 226 1.2199999999999999e-54   NTclustered gi|596103701|gb|KC907695.1| 215699 g53644 i0 85.581 93.0534979423868 215 31 88 0 8 222 777 563 Eutreptiella pomquetensis strain CCMP 1491 clone 2 beta-tubulin (tubB) gene, partial cds blastn 22612 226 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella pomquetensis
6309070 6309070 PRJNA760976_P_NODE_39825_length_272_cov_1.271357_g39504_i0 PRJNA760976 39825 272 1.271357 3.45809104 Decastava 1911741 Euglenozoa other_Eukaryota 486 5.7699999999999996e-133   NTclustered gi|937541987|gb|KP306753.1| 1732396 g39504 i0 98.897 60.8125 272 3 100 0 1 272 1835 2106 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 16541 486 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
7121121 7121121 PRJNA760976_P_NODE_33086_length_292_cov_1.136986_g32765_i0 PRJNA760976 33086 292 1.136986 3.31999912 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 220 7.01e-53   NTclustered gi|2119431529|ref|XM_044691764.1| 51637 g32765 i0 81.071 19.8390410958904 280 49 95 4 2 279 278 1 Naegleria lovaniensis uncharacterized protein (C9374_002355), partial mRNA blastn 5793 220 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
8395613 8395613 PRJNA760976_P_NODE_22927_length_332_cov_1.772201_g22606_i0 PRJNA760976 22927 332 1.772201 5.88370732 Rhynchobodo ATCC50359 51334 Euglenozoa other_Eukaryota 274 6.129999999999998e-69   NTclustered gi|226347448|gb|FJ807264.1| 51334 g22606 i0 82.951 34.144578313253 305 48 91 3 16 318 597 295 Rhynchobodo ATCC50359 elongation factor 1 alpha gene, partial cds blastn 11336 274 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo ATCC50359
9670769 9670769 PRJNA760976_P_NODE_25668_length_320_cov_0.910931_g25347_i0 PRJNA760976 25668 320 0.910931 2.9149792 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 182 3.669999999999999e-41   NTclustered gi|788015356|ref|XM_011778752.1| 679716 g25347 i0 87.742 12.325 155 19 48 0 10 164 121 275 Trypanosoma brucei gambiense DAL972 kinetoplastid membrane protein KMP-11 partial mRNA blastn 3944 182 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
17320708 17320708 PRJNA760976_P_NODE_37454_length_278_cov_2.931707_g37133_i0 PRJNA760976 37454 278 2.931707 8.15014546 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 514 2.7199999999999996e-141   NTclustered gi|77994657|gb|DQ207595.1| 127150 g37133 i0 100 88.1906474820144 278 0 100 0 1 278 1245 968 Rhynchomonas nasuta strain HFCC17 18S ribosomal RNA gene, partial sequence blastn 24517 514 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
21144857 21144857 PRJNA760976_P_NODE_11857_length_422_cov_1.022923_g11537_i0 PRJNA760976 11857 422 1.022923 4.31673506 Herpetomonas muscarum 5718 Euglenozoa other_Eukaryota 375 2.12e-99   NTclustered gi|226347430|gb|FJ807255.1| 5718 g11537 i0 82.938 98.9810426540284 422 66 99 3 4 422 622 1040 Herpetomonas muscarum strain ATCC 30260 elongation factor 1 alpha gene, partial cds blastn 41770 375 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum
23695403 23695403 PRJNA760976_P_NODE_9859_length_452_cov_1.387863_g9540_i0 PRJNA760976 9859 452 1.387863 6.27314076 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 496 1.68e-135   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g9540 i0 86.726 22.8871681415929 452 52 99 7 1 450 1081 636 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 10345 496 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
24968998 24968998 PRJNA760976_P_NODE_4480_length_621_cov_3.239051_g4171_i0 PRJNA760976 4480 621 3.239051 20.11450671 Phacus orbicularis 158829 Euglenozoa other_Eukaryota 182 7.529999999999998e-41   NTclustered gi|194368888|gb|EU624018.1| 158829 g4171 i0 85.311 28.2721417069243 177 24 28 2 446 621 1162 987 Phacus orbicularis strain MI 76 large subunit ribosomal RNA gene, partial sequence blastn 17557 182 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Phacaceae Phacus Phacus orbicularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;