RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA760976 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2018434 2018434 PRJNA760976_P_NODE_50502_length_247_cov_0.873563_g50181_i0 PRJNA760976 50502 247 0.873563 2.15770061 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 246 9.54e-61   NTclustered gi|837350690|gb|CP011211.1| 1619070 g50181 i0 85.294 0.963562753036437 238 35 96 0 1 238 624071 623834 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 238 246 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
16045009 16045009 PRJNA760976_P_NODE_36013_length_283_cov_1.023810_g35692_i0 PRJNA760976 36013 283 1.02381 2.8973823 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 52.8 0.026   NTclustered gi|2575820324|emb|OY730443.1| 2026781 g35692 i0 100 0.0989399293286219 28 0 10 0 13 40 1031835 1031862 MAG: Candidatus Poribacteria bacterium isolate dbacca32-2332-4c09-a5ad-da9f5ab17b7d genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;