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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA760976" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJNA760976 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742369 742369 PRJNA760976_P_NODE_3641_length_683_cov_3.018033_g3338_i0 PRJNA760976 3641 683 3.018033 20.61316539 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 230 2.929999999999999e-55   NTclustered gi|300078497|gb|GU001159.1| 200886 g3338 i0 75.61 26.8257686676428 533 93 74 24 4 509 2503 3025 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18322 230 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
2018323 2018323 PRJNA760976_P_NODE_13282_length_402_cov_5.018237_g12962_i0 PRJNA760976 13282 402 5.018237 20.17331274 Vannella ebro 207334 Discosea other_Eukaryota 531 4.06e-146   NTclustered gi|33946344|gb|AY294151.1| 207334 g12962 i0 91.26 97.5422885572139 389 34 97 0 1 389 401 13 Vannella ebro actin mRNA, complete cds blastn 39212 531 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
3756756 3756756 PRJNA760976_P_NODE_34763_length_286_cov_2.211268_g34442_i0 PRJNA760976 34763 286 2.211268 6.32422648 Physarum 5790 Evosea other_Eukaryota 246 1.13e-60   NTclustered gi|478735555|gb|KC473816.1| 1158133 g34442 i0 82.332 95.5909090909091 283 50 99 0 4 286 124 406 Physarum sp. MVO-2012 isolate LE 255712 elongation factor 1-alpha (tef1) gene, partial cds blastn 27339 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
5846028 5846028 PRJNA760976_P_NODE_6265_length_540_cov_1.128480_g5949_i0 PRJNA760976 6265 540 1.12848 6.093792 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 610 6.98e-170   NTclustered gi|167859711|gb|EU273435.1| 1346289 g5949 i0 87.037 100.874074074074 540 70 100 0 1 540 697 158 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 54472 610 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
6309085 6309085 PRJNA760976_P_NODE_8865_length_471_cov_1.097990_g8546_i0 PRJNA760976 8865 471 1.09799 5.1715329 Diderma 289935 Evosea other_Eukaryota 348 5.220000000000001e-91   NTclustered gi|2785094397|gb|PP178614.1| 289974 g8546 i0 83.777 77.9044585987261 376 51 79 7 54 424 441 71 Diderma radiatum voucher HMJAU M10164-1 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 36693 348 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma radiatum
7121048 7121048 PRJNA760976_P_NODE_12946_length_407_cov_1.326347_g12626_i0 PRJNA760976 12946 407 1.326347 5.39823229 Amoeba proteus 5775 Tubulinea other_Eukaryota 592 1.86e-164   NTclustered gi|844573744|gb|KP411223.1| 5775 g12626 i0 93.317 0.992628992628993 404 22 98 3 5 404 21 423 Amoeba proteus Tom40 mRNA, complete cds blastn 404 592 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
7121161 7121161 PRJNA760976_P_NODE_49286_length_248_cov_2.565714_g48965_i0 PRJNA760976 49286 248 2.565714 6.36297072 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|66811303|ref|XM_634268.1| 352472 g48965 i0 100 1.81451612903226 30 0 12 0 143 172 3569 3598 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0282851) mRNA, complete cds blastn 450 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
8395601 8395601 PRJNA760976_P_NODE_17987_length_361_cov_2.569444_g17666_i0 PRJNA760976 17987 361 2.569444 9.27569284 Platyamoeba placida 3454475 Discosea other_Eukaryota 484 2.8499999999999995e-132   NTclustered gi|33946348|gb|AY294153.1| 197527 g17666 i0 90.859 100.396121883657 361 33 100 0 1 361 872 512 Platyamoeba placida actin mRNA, partial cds blastn 36243 484 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
9670876 9670876 PRJNA760976_P_NODE_7668_length_498_cov_1.251765_g7349_i0 PRJNA760976 7668 498 1.251765 6.2337897 Heterostelium album 2086695 Evosea other_Eukaryota 390 9.080000000000001e-104   NTclustered gi|1160574132|ref|XM_020577244.1| 670386 g7349 i0 81.224 97.8333333333333 490 86 98 6 12 498 987 501 Polysphondylium pallidum PN500 actin (act10), partial mRNA blastn 48721 390 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
10946492 10946492 PRJNA760976_P_NODE_48689_length_249_cov_4.772727_g48368_i0 PRJNA760976 48689 249 4.772727 11.88409023 Platyamoeba placida 3454475 Discosea other_Eukaryota 350 7.14e-92   NTclustered gi|33946348|gb|AY294153.1| 197527 g48368 i0 91.968 99.566265060241 249 20 100 0 1 249 708 956 Platyamoeba placida actin mRNA, partial cds blastn 24792 350 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
10946503 10946503 PRJNA760976_P_NODE_5129_length_586_cov_4.879142_g4818_i0 PRJNA760976 5129 586 4.879142 28.59177212 Vannella persistens 303303 Discosea other_Eukaryota 950 0   NTclustered gi|165968548|gb|EU377588.1| 303303 g4818 i0 95.911 87.1245733788396 587 23 100 1 1 586 130 716 Vannella persistens strain CRIB69 18S ribosomal RNA gene, partial sequence blastn 51055 950 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella persistens
12221969 12221969 PRJNA760976_P_NODE_19390_length_352_cov_4.878136_g19069_i0 PRJNA760976 19390 352 4.878136 17.17103872 Ripella decalvata 2047822 Discosea other_Eukaryota 562 1.2399999999999997e-155   NTclustered gi|1269228416|gb|MF683541.1| 2047822 g19069 i0 95.751 99.9659090909091 353 8 99 6 2 352 899 552 Ripella decalvata clone 26.1.53 18S ribosomal RNA gene, partial sequence blastn 35188 562 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
12222025 12222025 PRJNA760976_P_NODE_3930_length_659_cov_1.674061_g3624_i0 PRJNA760976 3930 659 1.674061 11.03206199 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 536 1.49e-147   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g3624 i0 81.818 40.4355083459788 671 92 99 21 1 658 32298 32951 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 26647 536 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
13496128 13496128 PRJNA760976_P_NODE_3431_length_703_cov_4.644444_g3129_i0 PRJNA760976 3431 703 4.644444 32.65044132 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 228 1.0899999999999999e-54   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g3129 i0 74.179 32.7809388335704 670 118 93 40 4 656 31907 32538 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 23045 228 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
14771230 14771230 PRJNA760976_P_NODE_17672_length_364_cov_1.058419_g17351_i0 PRJNA760976 17672 364 1.058419 3.85264516 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 348 3.93e-91   NTclustered gi|330902904|gb|JF298276.1| 313558 g17351 i0 84.123 100.164835164835 359 57 99 0 5 363 413 55 Cochliopodium spiniferum clone 5105 actin gene, partial cds blastn 36460 348 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
15233519 15233519 PRJNA760976_P_NODE_20392_length_346_cov_4.413919_g20071_i0 PRJNA760976 20392 346 4.413919 15.27215974 Vannellidae 95227 Discosea other_Eukaryota 569 7.31e-158   NTclustered gi|62865947|gb|AY929922.1| 325065 g20071 i0 96.286 100.439306358382 350 8 99 3 1 345 572 921 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 34752 569 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
16045092 16045092 PRJNA760976_P_NODE_7893_length_492_cov_1.608592_g7574_i0 PRJNA760976 7893 492 1.608592 7.91427264 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 514 5.09e-141   NTclustered gi|62865939|gb|AY929914.1| 325077 g7574 i0 96.238 63.6524390243902 319 3 64 5 176 492 3 314 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 31317 514 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
19869193 19869193 PRJNA760976_P_NODE_11336_length_429_cov_1.668539_g11016_i0 PRJNA760976 11336 429 1.668539 7.15803231 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 438 2.7199999999999993e-118   NTclustered gi|345452598|gb|JF694317.1| 1078852 g11016 i0 95.941 83.7878787878788 271 10 63 1 1 271 371 640 Pyxidicula operculata clone 2 actin gene, partial cds blastn 35945 438 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
20331431 20331431 PRJNA760976_P_NODE_4016_length_652_cov_6.770294_g3710_i0 PRJNA760976 4016 652 6.770294 44.14231688 Vexillifera 218659 Root_unresolved Root_unresolved 361 9.49e-95   NTclustered gi|221185864|gb|FJ577811.1| 590481 g3710 i0 85.326 32.3067484662577 368 33 60 14 191 537 1837 1470 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 21064 361 1 Eukaryota Amoebozoa             uncultured Amoebozoa
21144893 21144893 PRJNA760976_P_NODE_23577_length_329_cov_1.406250_g23256_i0 PRJNA760976 23577 329 1.40625 4.6265625 Physarum licheniforme 2116612 Evosea other_Eukaryota 289 2.17e-73   NTclustered gi|2049856367|gb|MG963525.1| 2116612 g23256 i0 82.675 96.9756838905775 329 53 99 4 3 329 200 526 Physarum licheniforme strain MA-Fungi 91207 elongation factor 1A (EF1a) gene, partial cds blastn 31905 289 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum licheniforme
22419639 22419639 PRJNA760976_P_NODE_22538_length_334_cov_3.030651_g22217_i0 PRJNA760976 22538 334 3.030651 10.12237434 Paravannella minima 1443144 Discosea other_Eukaryota 113 1.42e-20   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g22217 i0 74.214 3.44610778443114 318 61 93 18 16 325 2782 3086 Paravannella minima mitochondrion, complete genome blastn 1151 113 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
24968970 24968970 PRJNA760976_P_NODE_35220_length_285_cov_1.400943_g34899_i0 PRJNA760976 35220 285 1.400943 3.99268755 Heterostelium album 2086695 Evosea other_Eukaryota 224 5.269999999999999e-54   NTclustered gi|1160552074|ref|XM_020571371.1| 670386 g34899 i0 81.786 10.0070175438596 280 39 96 11 1 274 5 278 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 2852 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;