contig_metadata
43 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Tubulinea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 742210 | 742210 | PRJNA760904_P_NODE_12581_length_266_cov_2.357513_g12524_i0 | PRJNA760904 | 12581 | 266 | 2.357513 | 6.27098458 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 466 | 7.33e-127 | NTclustered | gi|88601195|gb|DQ384266.1| | 5778 | g12524 | i0 | 98.485 | 0.992481203007519 | 264 | 4 | 99 | 0 | 3 | 266 | 867 | 604 | Hartmannella vermiformis unknown mRNA | blastn | 264 | 466 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 1204880 | 1204880 | PRJNA760904_P_NODE_5641_length_362_cov_8.328720_g5584_i0 | PRJNA760904 | 5641 | 362 | 8.32872 | 30.1499664 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 669 | 0 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g5584 | i0 | 100 | 54.7016574585635 | 362 | 0 | 100 | 0 | 1 | 362 | 873 | 1234 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 19802 | 669 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 2018215 | 2018215 | PRJNA760904_P_NODE_12222_length_269_cov_1.571429_g12165_i0 | PRJNA760904 | 12222 | 269 | 1.571429 | 4.22714401 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 497 | 2.63e-136 | NTclustered | gi|292559443|ref|NC_013986.1| | 5778 | g12165 | i0 | 100 | 29.4014869888476 | 269 | 0 | 100 | 0 | 1 | 269 | 19100 | 19368 | Hartmannella vermiformis mitochondrion, complete genome | blastn | 7909 | 497 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 2018284 | 2018284 | PRJNA760904_P_NODE_5222_length_374_cov_1.269103_g5165_i0 | PRJNA760904 | 5222 | 374 | 1.269103 | 4.74644522 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 680 | 0 | NTclustered | gi|88601161|gb|DQ384328.1| | 5778 | g5165 | i0 | 99.465 | 4 | 374 | 2 | 100 | 0 | 1 | 374 | 403 | 776 | Hartmannella vermiformis glycosyl hydrolase A mRNA, partial cds | blastn | 1496 | 680 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 2480405 | 2480405 | PRJNA760904_P_NODE_14382_length_252_cov_2.837989_g14325_i0 | PRJNA760904 | 14382 | 252 | 2.837989 | 7.15173228 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 449 | 6.94e-122 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g14325 | i0 | 98.814 | 97.4920634920635 | 253 | 2 | 100 | 1 | 1 | 252 | 2073 | 2325 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 24568 | 449 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 3293500 | 3293500 | PRJNA760904_P_NODE_14503_length_251_cov_2.567416_g14446_i0 | PRJNA760904 | 14503 | 251 | 2.567416 | 6.44421416 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 427 | 3.2299999999999993e-115 | NTclustered | gi|88601093|gb|DQ373922.1| | 5778 | g14446 | i0 | 97.59 | 0.99203187250996006 | 249 | 6 | 99 | 0 | 3 | 251 | 300 | 52 | Hartmannella vermiformis aldehyde dehydrogenase mRNA, partial cds | blastn | 249 | 427 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 3293514 | 3293514 | PRJNA760904_P_NODE_1643_length_609_cov_3.442164_g1589_i0 | PRJNA760904 | 1643 | 609 | 3.442164 | 20.96277876 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 311 | 9.02e-80 | NTclustered | gi|66270666|gb|AY950658.1| | 5778 | g1589 | i0 | 100 | 12.5911330049261 | 168 | 0 | 28 | 0 | 442 | 609 | 1128 | 961 | Hartmannella vermiformis Nop58p mRNA, partial cds | blastn | 7668 | 311 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 3293556 | 3293556 | PRJNA760904_P_NODE_743_length_866_cov_2.767970_g697_i0 | PRJNA760904 | 743 | 866 | 2.76797 | 23.9706202 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1554 | 0 | NTclustered | gi|66270666|gb|AY950658.1| | 5778 | g697 | i0 | 99.076 | 1 | 866 | 7 | 99 | 1 | 1 | 865 | 11 | 876 | Hartmannella vermiformis Nop58p mRNA, partial cds | blastn | 866 | 1554 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5845794 | 5845794 | PRJNA760904_P_NODE_1425_length_652_cov_1.630397_g1371_i0 | PRJNA760904 | 1425 | 652 | 1.630397 | 10.63018844 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1125 | 0 | NTclustered | gi|88601205|gb|DQ384271.1| | 5778 | g1371 | i0 | 100 | 0.934049079754601 | 609 | 0 | 93 | 0 | 44 | 652 | 1 | 609 | Hartmannella vermiformis oxidoreductase mRNA, partial cds | blastn | 609 | 1125 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5845815 | 5845815 | PRJNA760904_P_NODE_185_length_1457_cov_6.812139_g164_i0 | PRJNA760904 | 185 | 1457 | 6.812139 | 99.25286523 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1519 | 0 | NTclustered | gi|421976335|gb|JQ519484.1| | 5778 | g164 | i0 | 96.224 | 73.0144131777625 | 927 | 35 | 64 | 0 | 180 | 1106 | 927 | 1 | Vermamoeba vermiformis clone JGHverm1 beta-tubulin gene, partial cds | blastn | 106382 | 1519 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5845831 | 5845831 | PRJNA760904_P_NODE_2725_length_494_cov_1.092637_g2668_i0 | PRJNA760904 | 2725 | 494 | 1.092637 | 5.39762678 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 880 | 0 | NTclustered | gi|62766456|gb|AY924418.1| | 5778 | g2668 | i0 | 98.785 | 1 | 494 | 6 | 100 | 0 | 1 | 494 | 179 | 672 | Hartmannella vermiformis chlorohydrolase family protein mRNA, partial cds | blastn | 494 | 880 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5845851 | 5845851 | PRJNA760904_P_NODE_725_length_875_cov_26.275561_g679_i0 | PRJNA760904 | 725 | 875 | 26.275561 | 229.91115875 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1445 | 0 | NTclustered | gi|62910949|gb|AY925001.1| | 5778 | g679 | i0 | 99.873 | 3.21485714285714 | 785 | 1 | 90 | 0 | 1 | 785 | 785 | 1 | Hartmannella vermiformis Rpl7A mRNA, partial cds | blastn | 2813 | 1445 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 7120982 | 7120982 | PRJNA760904_P_NODE_16786_length_248_cov_0.874286_g16729_i0 | PRJNA760904 | 16786 | 248 | 0.874286 | 2.16822928 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 453 | 5.2600000000000005e-123 | NTclustered | gi|88601127|gb|DQ390350.1| | 5778 | g16729 | i0 | 99.597 | 1 | 248 | 1 | 100 | 0 | 1 | 248 | 895 | 648 | Hartmannella vermiformis NHL repeat-containing protein mRNA, partial cds | blastn | 248 | 453 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 7120984 | 7120984 | PRJNA760904_P_NODE_1706_length_600_cov_2.324478_g1652_i0 | PRJNA760904 | 1706 | 600 | 2.324478 | 13.946868 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1070 | 0 | NTclustered | gi|89357383|gb|DQ407629.1| | 5778 | g1652 | i0 | 98.833 | 1.995 | 600 | 7 | 100 | 0 | 1 | 600 | 623 | 24 | Hartmannella vermiformis trehalose phosphate synthase-like protein cluster A mRNA, partial cds | blastn | 1197 | 1070 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 7121011 | 7121011 | PRJNA760904_P_NODE_4706_length_389_cov_38.436709_g4649_i0 | PRJNA760904 | 4706 | 389 | 38.436709 | 149.51879801 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 641 | 1.7299999999999995e-179 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g4649 | i0 | 98.356 | 22.6015424164524 | 365 | 6 | 94 | 0 | 25 | 389 | 7104 | 6740 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 8792 | 641 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 7121033 | 7121033 | PRJNA760904_P_NODE_966_length_777_cov_1.980114_g916_i0 | PRJNA760904 | 966 | 777 | 1.980114 | 15.38548578 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1373 | 0 | NTclustered | gi|146335208|gb|EF216680.1| | 5778 | g916 | i0 | 98.465 | 1.00643500643501 | 782 | 7 | 100 | 1 | 1 | 777 | 1376 | 2157 | Hartmannella vermiformis transketolase mRNA, complete cds | blastn | 782 | 1373 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 8395530 | 8395530 | PRJNA760904_P_NODE_3047_length_470_cov_1.350126_g2990_i0 | PRJNA760904 | 3047 | 470 | 1.350126 | 6.3455922 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 745 | 0 | NTclustered | gi|89357385|gb|DQ407630.1| | 5778 | g2990 | i0 | 98.804 | 1.2936170212766 | 418 | 5 | 89 | 0 | 53 | 470 | 1 | 418 | Hartmannella vermiformis trehalose phosphate synthase-like protein cluster B mRNA, partial cds | blastn | 608 | 745 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 8395531 | 8395531 | PRJNA760904_P_NODE_327_length_1220_cov_3.126417_g302_i0 | PRJNA760904 | 327 | 1220 | 3.126417 | 38.1422874 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 2231 | 0 | NTclustered | gi|146335208|gb|EF216680.1| | 5778 | g302 | i0 | 99.917 | 5.97704918032787 | 1211 | 1 | 99 | 0 | 2 | 1212 | 1211 | 1 | Hartmannella vermiformis transketolase mRNA, complete cds | blastn | 7292 | 2231 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 8395534 | 8395534 | PRJNA760904_P_NODE_3547_length_439_cov_1.262295_g3490_i0 | PRJNA760904 | 3547 | 439 | 1.262295 | 5.54147505 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 267 | 1.39e-66 | NTclustered | gi|89357383|gb|DQ407629.1| | 5778 | g3490 | i0 | 98.667 | 0.425968109339408 | 150 | 2 | 34 | 0 | 290 | 439 | 1053 | 904 | Hartmannella vermiformis trehalose phosphate synthase-like protein cluster A mRNA, partial cds | blastn | 187 | 267 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 9670699 | 9670699 | PRJNA760904_P_NODE_4528_length_396_cov_1.287926_g4471_i0 | PRJNA760904 | 4528 | 396 | 1.287926 | 5.10018696 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 237 | 9.75e-58 | NTclustered | gi|327179545|gb|HM104303.1| | 5778 | g4471 | i0 | 93.168 | 0.406565656565657 | 161 | 11 | 41 | 0 | 233 | 393 | 255 | 415 | Hartmannella vermiformis isolate CDC-19 glucosamine-6-phosphate isomerase (GPI) gene, partial cds | blastn | 161 | 237 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 10946356 | 10946356 | PRJNA760904_P_NODE_19709_length_242_cov_2.692308_g19652_i0 | PRJNA760904 | 19709 | 242 | 2.692308 | 6.51538536 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 300 | 7.05e-77 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g19652 | i0 | 89.669 | 1 | 242 | 15 | 99 | 7 | 3 | 242 | 433 | 200 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 242 | 300 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 10946380 | 10946380 | PRJNA760904_P_NODE_5909_length_356_cov_1.084806_g5852_i0 | PRJNA760904 | 5909 | 356 | 1.084806 | 3.86190936 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 501 | 2.779999999999999e-137 | NTclustered | gi|88601203|gb|DQ384270.1| | 5778 | g5852 | i0 | 98.587 | 0.794943820224719 | 283 | 4 | 79 | 0 | 73 | 355 | 1 | 283 | Hartmannella vermiformis sugar transporter mRNA, partial cds | blastn | 283 | 501 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 12684668 | 12684668 | PRJNA760904_P_NODE_4710_length_389_cov_4.588608_g4653_i0 | PRJNA760904 | 4710 | 389 | 4.588608 | 17.84968512 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 719 | 0 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g4653 | i0 | 100 | 20.9537275064267 | 389 | 0 | 100 | 0 | 1 | 389 | 1234 | 1622 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 8151 | 719 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 13496029 | 13496029 | PRJNA760904_P_NODE_371_length_1150_cov_2.061281_g343_i0 | PRJNA760904 | 371 | 1150 | 2.061281 | 23.7047315 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1375 | 0 | NTclustered | gi|88601125|gb|DQ390349.1| | 5778 | g343 | i0 | 97.747 | 0.694782608695652 | 799 | 16 | 69 | 2 | 48 | 845 | 798 | 1 | Hartmannella vermiformis copper-containing nitrite reductase mRNA, partial cds | blastn | 799 | 1375 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 14771137 | 14771137 | PRJNA760904_P_NODE_17912_length_246_cov_0.890173_g17855_i0 | PRJNA760904 | 17912 | 246 | 0.890173 | 2.18982558 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 248 | 2.6399999999999997e-61 | NTclustered | gi|88601117|gb|DQ390345.1| | 5778 | g17855 | i0 | 99.275 | 0.560975609756098 | 138 | 0 | 56 | 1 | 109 | 246 | 1 | 137 | Hartmannella vermiformis sodium:galactoside symporter-like protein mRNA, partial cds | blastn | 138 | 248 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 14771167 | 14771167 | PRJNA760904_P_NODE_2252_length_535_cov_3.324675_g2196_i0 | PRJNA760904 | 2252 | 535 | 3.324675 | 17.78701125 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 619 | 1.15e-172 | NTclustered | gi|88601207|gb|DQ384272.1| | 5778 | g2196 | i0 | 99.128 | 0.642990654205608 | 344 | 3 | 64 | 0 | 143 | 486 | 14 | 357 | Hartmannella vermiformis unknown mRNA | blastn | 344 | 619 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 14771204 | 14771204 | PRJNA760904_P_NODE_9752_length_289_cov_1.425926_g9695_i0 | PRJNA760904 | 9752 | 289 | 1.425926 | 4.12092614 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 287 | 6.740000000000001e-73 | NTclustered | gi|327179545|gb|HM104303.1| | 5778 | g9695 | i0 | 89.13 | 0.972318339100346 | 230 | 25 | 97 | 0 | 53 | 282 | 1080 | 1309 | Hartmannella vermiformis isolate CDC-19 glucosamine-6-phosphate isomerase (GPI) gene, partial cds | blastn | 281 | 287 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 16044877 | 16044877 | PRJNA760904_P_NODE_12933_length_264_cov_1.539267_g12876_i0 | PRJNA760904 | 12933 | 264 | 1.539267 | 4.06366488 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 237 | 6.2e-58 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g12876 | i0 | 83.465 | 33.1174242424242 | 254 | 42 | 96 | 0 | 3 | 256 | 455 | 202 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 8743 | 237 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 16044924 | 16044924 | PRJNA760904_P_NODE_4133_length_412_cov_0.902655_g4076_i0 | PRJNA760904 | 4133 | 412 | 0.902655 | 3.7189386 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 431 | 4.349999999999999e-116 | NTclustered | gi|88601199|gb|DQ384268.1| | 5778 | g4076 | i0 | 97.628 | 3.89077669902913 | 253 | 3 | 61 | 1 | 1 | 253 | 250 | 1 | Hartmannella vermiformis aminopeptidase B mRNA, partial cds | blastn | 1603 | 431 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 16044941 | 16044941 | PRJNA760904_P_NODE_7173_length_329_cov_1.742188_g7116_i0 | PRJNA760904 | 7173 | 329 | 1.742188 | 5.73179852 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 460 | 4.34e-125 | NTclustered | gi|88601165|gb|DQ384330.1| | 5778 | g7116 | i0 | 100 | 1.51367781155015 | 249 | 0 | 76 | 0 | 81 | 329 | 660 | 412 | Hartmannella vermiformis succinyl-diaminopimelate desuccinylase-like protein B mRNA, partial cds | blastn | 498 | 460 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17320503 | 17320503 | PRJNA760904_P_NODE_11434_length_275_cov_2.039604_g11377_i0 | PRJNA760904 | 11434 | 275 | 2.039604 | 5.608911 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 497 | 2.7e-136 | NTclustered | gi|68161260|gb|AY923750.1| | 5778 | g11377 | i0 | 99.273 | 1 | 275 | 2 | 100 | 0 | 1 | 275 | 370 | 96 | Hartmannella vermiformis CmfA-like protein mRNA, partial cds | blastn | 275 | 497 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17320606 | 17320606 | PRJNA760904_P_NODE_9714_length_289_cov_2.842593_g9657_i0 | PRJNA760904 | 9714 | 289 | 2.842593 | 8.21509377 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 523 | 4.7199999999999987e-144 | NTclustered | gi|89357361|gb|DQ407618.1| | 5778 | g9657 | i0 | 99.308 | 1 | 289 | 2 | 100 | 0 | 1 | 289 | 474 | 186 | Hartmannella vermiformis cudA-like protein D mRNA, partial cds | blastn | 289 | 523 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17782588 | 17782588 | PRJNA760904_P_NODE_14374_length_252_cov_9.692737_g14317_i0 | PRJNA760904 | 14374 | 252 | 9.692737 | 24.42569724 | Tubulinea | 555369 | Tubulinea | other_Eukaryota | 466 | 6.89e-127 | NTclustered | gi|399764177|gb|JQ271688.1| | 5778 | g14317 | i0 | 100 | 99.9920634920635 | 252 | 0 | 100 | 0 | 1 | 252 | 385 | 134 | Hartmannella vermiformis strain ECH26 18S ribosomal RNA gene, partial sequence | blastn | 25198 | 466 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 18593965 | 18593965 | PRJNA760904_P_NODE_7835_length_317_cov_1.430328_g7778_i0 | PRJNA760904 | 7835 | 317 | 1.430328 | 4.53413976 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 492 | 1.48e-134 | NTclustered | gi|88601195|gb|DQ384266.1| | 5778 | g7778 | i0 | 99.628 | 0.848580441640379 | 269 | 1 | 85 | 0 | 5 | 273 | 269 | 1 | Hartmannella vermiformis unknown mRNA | blastn | 269 | 492 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 19869135 | 19869135 | PRJNA760904_P_NODE_1876_length_577_cov_1.589286_g1820_i0 | PRJNA760904 | 1876 | 577 | 1.589286 | 9.17018022 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 793 | 0 | NTclustered | gi|89357389|gb|DQ407632.1| | 5778 | g1820 | i0 | 99.093 | 0.764298093587522 | 441 | 4 | 76 | 0 | 3 | 443 | 1 | 441 | Hartmannella vermiformis trehalose phosphate synthase-like protein cluster D mRNA, partial cds | blastn | 441 | 793 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 22882665 | 22882665 | PRJNA760904_P_NODE_14118_length_254_cov_4.066298_g14061_i0 | PRJNA760904 | 14118 | 254 | 4.066298 | 10.32839692 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 470 | 5.37e-128 | NTclustered | gi|2304349760|gb|OP454452.1| | 5778 | g14061 | i0 | 100 | 76.4173228346457 | 254 | 0 | 100 | 0 | 1 | 254 | 430 | 177 | Vermamoeba vermiformis strain SFI-3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence | blastn | 19410 | 470 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 22882684 | 22882684 | PRJNA760904_P_NODE_18598_length_244_cov_1.801170_g18541_i0 | PRJNA760904 | 18598 | 244 | 1.80117 | 4.3948548 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 446 | 8.639999999999999e-121 | NTclustered | gi|2777861736|gb|PQ072230.1| | 5778 | g18541 | i0 | 99.59 | 100.004098360656 | 244 | 1 | 100 | 0 | 1 | 244 | 1564 | 1321 | Vermamoeba vermiformis strain CCAP_1534_12_consensus_sequence small subunit ribosomal RNA gene, partial sequence | blastn | 24401 | 446 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 23695142 | 23695142 | PRJNA760904_P_NODE_10399_length_284_cov_1.459716_g10342_i0 | PRJNA760904 | 10399 | 284 | 1.459716 | 4.14559344 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 342 | 1.3899999999999999e-89 | NTclustered | gi|89357361|gb|DQ407618.1| | 5778 | g10342 | i0 | 98.953 | 0.672535211267606 | 191 | 2 | 67 | 0 | 92 | 282 | 1 | 191 | Hartmannella vermiformis cudA-like protein D mRNA, partial cds | blastn | 191 | 342 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 23695184 | 23695184 | PRJNA760904_P_NODE_19219_length_243_cov_1.105882_g19162_i0 | PRJNA760904 | 19219 | 243 | 1.105882 | 2.68729326 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 241 | 4.36e-59 | NTclustered | gi|89357355|gb|DQ407615.1| | 5778 | g19162 | i0 | 100 | 1.04938271604938 | 130 | 0 | 53 | 0 | 114 | 243 | 246 | 117 | Hartmannella vermiformis cudA-like protein A mRNA, partial cds | blastn | 255 | 241 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 23695221 | 23695221 | PRJNA760904_P_NODE_679_length_900_cov_3.561064_g634_i0 | PRJNA760904 | 679 | 900 | 3.561064 | 32.049576 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 1644 | 0 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g634 | i0 | 99.666 | 78.8422222222222 | 899 | 3 | 99 | 0 | 2 | 900 | 3138 | 2240 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 70958 | 1644 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 24968795 | 24968795 | PRJNA760904_P_NODE_1040_length_748_cov_3.602963_g990_i0 | PRJNA760904 | 1040 | 748 | 3.602963 | 26.95016324 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 754 | 0 | NTclustered | gi|89357437|gb|DQ407656.1| | 5778 | g990 | i0 | 99.757 | 1.09893048128342 | 411 | 1 | 55 | 0 | 181 | 591 | 411 | 1 | Hartmannella vermiformis chitinase-like protein cluster A mRNA, partial cds | blastn | 822 | 754 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 24968834 | 24968834 | PRJNA760904_P_NODE_16520_length_248_cov_0.880000_g16463_i0 | PRJNA760904 | 16520 | 248 | 0.88 | 2.1824 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 453 | 5.2600000000000005e-123 | NTclustered | gi|61968704|gb|AY803784.1| | 5778 | g16463 | i0 | 99.597 | 1 | 248 | 1 | 100 | 0 | 1 | 248 | 352 | 105 | Hartmannella vermiformis vacuolar protein sorting protein 26 (vps26) gene, partial cds | blastn | 248 | 453 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 24968837 | 24968837 | PRJNA760904_P_NODE_16900_length_247_cov_1.310345_g16843_i0 | PRJNA760904 | 16900 | 247 | 1.310345 | 3.23655215 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 283 | 7.269999999999999e-72 | NTclustered | gi|88601127|gb|DQ390350.1| | 5778 | g16843 | i0 | 99.363 | 0.635627530364372 | 157 | 0 | 64 | 1 | 91 | 247 | 9 | 164 | Hartmannella vermiformis NHL repeat-containing protein mRNA, partial cds | blastn | 157 | 283 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;