RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA760904 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2018226 2018226 PRJNA760904_P_NODE_13862_length_256_cov_2.306011_g13805_i0 PRJNA760904 13862 256 2.306011 5.90338816 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 326 1.2399999999999999e-84   NTclustered gi|1532673573|gb|MH663466.1| 2495572 g13805 i0 89.764 34.5859375 254 26 99 0 1 254 1533 1280 Stenostomum cf. simplex AW-2018 cytochrome c oxidase subunit 1 (cox1) gene, complete cds; mitochondrial blastn 8854 326 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
9670702 9670702 PRJNA760904_P_NODE_568_length_967_cov_36.097315_g528_i0 PRJNA760904 568 967 36.097315 349.06103605 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 1668 0   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g528 i0 98.62 6.27714581178904 942 13 97 0 2 943 942 1 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 6070 1668 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
16044929 16044929 PRJNA760904_P_NODE_4593_length_393_cov_3.456250_g4536_i0 PRJNA760904 4593 393 3.45625 13.5830625 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 231 4.499999999999999e-56   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g4536 i0 82.593 8.07888040712468 270 39 68 6 127 392 5369 5104 Stenostomum sthenum mitochondrion, complete genome blastn 3175 231 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
22419574 22419574 PRJNA760904_P_NODE_278_length_1285_cov_3.750000_g256_i0 PRJNA760904 278 1285 3.75 48.1875 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 1628 0   NTclustered gi|1532673573|gb|MH663466.1| 2495572 g256 i0 89.502 76.4365758754864 1286 133 100 2 1 1285 8 1292 Stenostomum cf. simplex AW-2018 cytochrome c oxidase subunit 1 (cox1) gene, complete cds; mitochondrial blastn 98221 1628 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;