contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 742216 | 742216 | PRJNA760904_P_NODE_14501_length_251_cov_2.758427_g14444_i0 | PRJNA760904 | 14501 | 251 | 2.758427 | 6.92365177 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 54.7 | 0.006 | NTclustered | gi|675201180|ref|XM_008911227.1| | 761204 | g14444 | i0 | 96.875 | 0.685258964143426 | 32 | 1 | 13 | 0 | 10 | 41 | 421 | 452 | Phytophthora parasitica INRA-310 hypothetical protein mRNA | blastn | 172 | 54.7 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 742269 | 742269 | PRJNA760904_P_NODE_5101_length_377_cov_10.717105_g5044_i0 | PRJNA760904 | 5101 | 377 | 10.717105 | 40.40348585 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 272 | 2.53e-68 | NTclustered | gi|695460853|ref|XM_009539792.1| | 67593 | g5044 | i0 | 83.333 | 70.9681697612732 | 294 | 49 | 78 | 0 | 42 | 335 | 16 | 309 | Phytophthora sojae hypothetical protein mRNA | blastn | 26755 | 272 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 2018234 | 2018234 | PRJNA760904_P_NODE_15462_length_250_cov_0.870056_g15405_i0 | PRJNA760904 | 15462 | 250 | 0.870056 | 2.17514 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 318 | 2.02e-82 | NTclustered | gi|166039078|emb|CU357279.1| | 100861 | g15405 | i0 | 89.6 | 6.516 | 250 | 26 | 100 | 0 | 1 | 250 | 442 | 193 | Aphanomyces euteiches cDNA | blastn | 1629 | 318 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 4570629 | 4570629 | PRJNA760904_P_NODE_4684_length_390_cov_2.182965_g4627_i0 | PRJNA760904 | 4684 | 390 | 2.182965 | 8.5135635 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 375 | 1.95e-99 | NTclustered | gi|2795055209|ref|XM_067932227.1| | 4785 | g4627 | i0 | 84.375 | 98.8717948717949 | 384 | 58 | 98 | 2 | 2 | 384 | 524 | 142 | Phytophthora cinnamomi succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial (IUM83_07895), partial mRNA | blastn | 38560 | 375 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 8395478 | 8395478 | PRJNA760904_P_NODE_10747_length_281_cov_1.480769_g10690_i0 | PRJNA760904 | 10747 | 281 | 1.480769 | 4.16096089 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 340 | 4.939999999999999e-89 | NTclustered | gi|698793353|ref|XM_009831407.1| | 112090 | g10690 | i0 | 89.17 | 3.94306049822064 | 277 | 25 | 98 | 4 | 7 | 281 | 305 | 32 | Aphanomyces astaci hypothetical protein mRNA | blastn | 1108 | 340 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 8395532 | 8395532 | PRJNA760904_P_NODE_3327_length_451_cov_3.542328_g3270_i0 | PRJNA760904 | 3327 | 451 | 3.542328 | 15.97589928 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 230 | 1.8799999999999996e-55 | NTclustered | gi|698820832|ref|XM_009845143.1| | 112090 | g3270 | i0 | 78.917 | 37.079822616408 | 351 | 64 | 76 | 5 | 35 | 377 | 422 | 74 | Aphanomyces astaci 40S ribosomal protein S20 mRNA | blastn | 16723 | 230 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 8395542 | 8395542 | PRJNA760904_P_NODE_4567_length_394_cov_2.239875_g4510_i0 | PRJNA760904 | 4567 | 394 | 2.239875 | 8.8251075 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 200 | 1.27e-46 | NTclustered | gi|695431986|ref|XM_009532530.1| | 67593 | g4510 | i0 | 82.819 | 22.3197969543147 | 227 | 35 | 57 | 4 | 170 | 394 | 1203 | 979 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 8794 | 200 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 9670693 | 9670693 | PRJNA760904_P_NODE_3328_length_451_cov_3.208995_g3271_i0 | PRJNA760904 | 3328 | 451 | 3.208995 | 14.47256745 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 195 | 6.859999999999999e-45 | NTclustered | gi|813119311|ref|XM_012340836.1| | 695850 | g3271 | i0 | 79.11 | 6.39911308203991 | 292 | 54 | 64 | 6 | 21 | 310 | 408 | 122 | Saprolegnia parasitica CBS 223.65 60S ribosomal protein mRNA | blastn | 2886 | 195 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 10946364 | 10946364 | PRJNA760904_P_NODE_21389_length_217_cov_4.055556_g21332_i0 | PRJNA760904 | 21389 | 217 | 4.055556 | 8.80055652 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 78.7 | 3.16e-10 | NTclustered | gi|2795032822|ref|XM_067928242.1| | 4785 | g21332 | i0 | 81 | 0.460829493087558 | 100 | 17 | 46 | 2 | 1 | 99 | 862 | 960 | Phytophthora cinnamomi serine/threonine-protein phosphatase PP2A (IUM83_04186), partial mRNA | blastn | 100 | 78.7 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 13496040 | 13496040 | PRJNA760904_P_NODE_6391_length_344_cov_1.704797_g6334_i0 | PRJNA760904 | 6391 | 344 | 1.704797 | 5.86450168 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 230 | 1.4e-55 | NTclustered | gi|673019759|ref|XM_008865619.1| | 157072 | g6334 | i0 | 83.951 | 55.1453488372093 | 243 | 35 | 70 | 4 | 82 | 322 | 126 | 366 | Aphanomyces invadans 40S ribosomal protein S23 mRNA | blastn | 18970 | 230 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 14771113 | 14771113 | PRJNA760904_P_NODE_13392_length_260_cov_1.598930_g13335_i0 | PRJNA760904 | 13392 | 260 | 1.59893 | 4.157218 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 357 | 4.48e-94 | NTclustered | gi|166036466|emb|CU349508.1| | 100861 | g13335 | i0 | 91.473 | 19.0192307692308 | 258 | 22 | 99 | 0 | 1 | 258 | 469 | 726 | Aphanomyces euteiches cDNA | blastn | 4945 | 357 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 16044918 | 16044918 | PRJNA760904_P_NODE_3233_length_457_cov_2.536458_g3176_i0 | PRJNA760904 | 3233 | 457 | 2.536458 | 11.59161306 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 322 | 3.06e-83 | NTclustered | gi|301107276|ref|XM_002902675.1| | 403677 | g3176 | i0 | 80.37 | 67.5711159737418 | 433 | 77 | 93 | 7 | 1 | 427 | 438 | 8 | Phytophthora infestans T30-4 adenosylhomocysteinase (PITG_10198), partial mRNA | blastn | 30880 | 322 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 18593905 | 18593905 | PRJNA760904_P_NODE_13595_length_258_cov_3.243243_g13538_i0 | PRJNA760904 | 13595 | 258 | 3.243243 | 8.36756694 | Pseudoperonospora celtidis | 291623 | SAR_Eukaryotes | SAR_Eukaryotes | 147 | 1.0500000000000001e-30 | NTclustered | gi|327206210|gb|JF414536.1| | 291623 | g13538 | i0 | 79.147 | 11.0232558139535 | 211 | 41 | 81 | 3 | 2 | 210 | 1168 | 959 | Pseudoperonospora celtidis isolate SMK17780 cytochrome c oxidase subunit II (cox2) and cytochrome c oxidase subunit I (cox1) genes, partial cds; mitochondrial | blastn | 2844 | 147 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Pseudoperonospora | Pseudoperonospora celtidis | ||
| 18593935 | 18593935 | PRJNA760904_P_NODE_20955_length_240_cov_2.389222_g20898_i0 | PRJNA760904 | 20955 | 240 | 2.389222 | 5.7341328 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 322 | 1.49e-83 | NTclustered | gi|673025997|ref|XM_008868738.1| | 157072 | g20898 | i0 | 91.453 | 14.0125 | 234 | 20 | 98 | 0 | 2 | 235 | 274 | 507 | Aphanomyces invadans 40S ribosomal protein S20 mRNA | blastn | 3363 | 322 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 19869097 | 19869097 | PRJNA760904_P_NODE_12096_length_270_cov_1.563452_g12039_i0 | PRJNA760904 | 12096 | 270 | 1.563452 | 4.2213204 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 337 | 6.1e-88 | NTclustered | gi|673038061|ref|XM_008874770.1| | 157072 | g12039 | i0 | 89.811 | 3.44074074074074 | 265 | 23 | 97 | 1 | 1 | 261 | 101 | 365 | Aphanomyces invadans 60S ribosomal protein L38 mRNA | blastn | 929 | 337 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 19869108 | 19869108 | PRJNA760904_P_NODE_14176_length_254_cov_1.696133_g14119_i0 | PRJNA760904 | 14176 | 254 | 1.696133 | 4.30817782 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 141 | 4.78e-29 | NTclustered | gi|2795026431|ref|XM_067934112.1| | 4785 | g14119 | i0 | 77.255 | 2.91732283464567 | 255 | 48 | 98 | 8 | 5 | 254 | 1020 | 771 | Phytophthora cinnamomi Acetyl-CoA acetyltransferase (IUM83_09660), partial mRNA | blastn | 741 | 141 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 20331392 | 20331392 | PRJNA760904_P_NODE_2676_length_498_cov_1.449412_g2619_i0 | PRJNA760904 | 2676 | 498 | 1.449412 | 7.21807176 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 209 | 2.73e-49 | NTclustered | gi|813198223|ref|XM_012353305.1| | 695850 | g2619 | i0 | 79.932 | 57.2971887550201 | 294 | 51 | 58 | 7 | 209 | 498 | 662 | 373 | Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA | blastn | 28534 | 209 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 20331410 | 20331410 | PRJNA760904_P_NODE_816_length_826_cov_1.528552_g767_i0 | PRJNA760904 | 816 | 826 | 1.528552 | 12.62583952 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 688 | 0 | NTclustered | gi|189085060|gb|BT032592.1| | 4784 | g767 | i0 | 82.104 | 81.8389830508475 | 827 | 126 | 99 | 13 | 8 | 826 | 449 | 1261 | Phytophthora capsici clone CBOU109-N08 mRNA sequence | blastn | 67599 | 689 | 0.998548621190131 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora capsici | ||
| 21144783 | 21144783 | PRJNA760904_P_NODE_15717_length_249_cov_1.306818_g15660_i0 | PRJNA760904 | 15717 | 249 | 1.306818 | 3.25397682 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 250 | 7.4499999999999995e-62 | NTclustered | gi|695406619|ref|XM_009525862.1| | 67593 | g15660 | i0 | 85.185 | 71.5863453815261 | 243 | 36 | 98 | 0 | 6 | 248 | 715 | 957 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 17825 | 250 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 21144834 | 21144834 | PRJNA760904_P_NODE_6097_length_351_cov_1.661871_g6040_i0 | PRJNA760904 | 6097 | 351 | 1.661871 | 5.83316721 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 388 | 2.23e-103 | NTclustered | gi|698812671|ref|XM_009841063.1| | 112090 | g6040 | i0 | 89.137 | 3.13390313390313 | 313 | 32 | 89 | 2 | 40 | 351 | 643 | 332 | Aphanomyces astaci ribosomal protein L22 mRNA | blastn | 1100 | 388 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 22419579 | 22419579 | PRJNA760904_P_NODE_3418_length_446_cov_2.268097_g3361_i0 | PRJNA760904 | 3418 | 446 | 2.268097 | 10.11571262 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 442 | 2.189999999999999e-119 | NTclustered | gi|675187766|ref|XM_008904520.1| | 761204 | g3361 | i0 | 85.919 | 90.8834080717489 | 419 | 54 | 93 | 5 | 1 | 416 | 548 | 132 | Phytophthora parasitica INRA-310 GTP-binding nuclear protein ran-1 mRNA | blastn | 40534 | 442 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 23695203 | 23695203 | PRJNA760904_P_NODE_339_length_1202_cov_3.022143_g312_i0 | PRJNA760904 | 339 | 1202 | 3.022143 | 36.32615886 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 682 | 0 | NTclustered | gi|695434305|ref|XM_009533098.1| | 67593 | g312 | i0 | 82.073 | 74.5299500831947 | 820 | 127 | 67 | 11 | 207 | 1016 | 1418 | 609 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 89585 | 682 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 24156692 | 24156692 | PRJNA760904_P_NODE_3199_length_459_cov_2.121762_g3142_i0 | PRJNA760904 | 3199 | 459 | 2.121762 | 9.73888758 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 318 | 3.9799999999999996e-82 | NTclustered | gi|813115972|ref|XM_012340060.1| | 695850 | g3142 | i0 | 80.23 | 64.797385620915 | 435 | 76 | 94 | 10 | 12 | 441 | 63 | 492 | Saprolegnia parasitica CBS 223.65 40S ribosomal protein S23 mRNA | blastn | 29742 | 318 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 24968865 | 24968865 | PRJNA760904_P_NODE_3860_length_424_cov_1.176638_g3803_i0 | PRJNA760904 | 3860 | 424 | 1.176638 | 4.98894512 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 244 | 6.28e-60 | NTclustered | gi|2794919585|ref|XM_067895150.1| | 164328 | g3803 | i0 | 77.75 | 14.5896226415094 | 400 | 88 | 94 | 1 | 19 | 417 | 3 | 402 | Phytophthora ramorum 40S ribosomal protein S4 (KRP23_9578), partial mRNA | blastn | 6186 | 244 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 24968875 | 24968875 | PRJNA760904_P_NODE_5560_length_365_cov_1.054795_g5503_i0 | PRJNA760904 | 5560 | 365 | 1.054795 | 3.85000175 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 163 | 1.53e-35 | NTclustered | gi|166039156|emb|CU355206.1| | 100861 | g5503 | i0 | 79.832 | 0.652054794520548 | 238 | 37 | 64 | 9 | 33 | 265 | 675 | 444 | Aphanomyces euteiches cDNA | blastn | 238 | 163 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;