RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA760904 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2480410 2480410 PRJNA760904_P_NODE_15762_length_249_cov_0.875000_g15705_i0 PRJNA760904 15762 249 0.875 2.17875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 217 7.55e-52   NTclustered gi|1160556590|ref|XM_020574120.1| 670386 g15705 i0 87.302 65.6626506024096 189 24 76 0 7 195 682 870 Polysphondylium pallidum PN500 S-adenosylmethionine synthetase (metK), partial mRNA blastn 16350 219 0.990867579908676 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
4570624 4570624 PRJNA760904_P_NODE_4204_length_409_cov_1.372024_g4147_i0 PRJNA760904 4204 409 1.372024 5.61157816 Dictyostelium purpureum 5786 Evosea other_Eukaryota 438 2.5799999999999998e-118   NTclustered gi|330840543|ref|XM_003292226.1| 5786 g4147 i0 89.368 80.0757946210269 348 37 85 0 62 409 30 377 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92832), mRNA blastn 32751 438 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5845854 5845854 PRJNA760904_P_NODE_8105_length_313_cov_1.283333_g8048_i0 PRJNA760904 8105 313 1.283333 4.01683229 Diachea leucopodia 385471 Evosea other_Eukaryota 239 2.09e-58   NTclustered gi|2805783493|gb|PP796513.1| 385471 g8048 i0 81.356 95.9488817891374 295 53 94 2 20 313 1 294 Diachea leucopodia translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 30032 239 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Diachea Diachea leucopodia
7582948 7582948 PRJNA760904_P_NODE_14806_length_251_cov_0.865169_g14749_i0 PRJNA760904 14806 251 0.865169 2.17157419 Dictyostelium 5782 Evosea other_Eukaryota 215 2.74e-51   NTclustered gi|5759300|gb|AF176121.1|AF176121 44689 g14749 i0 82.4 72.5059760956175 250 40 99 3 1 248 402 649 Dictyostelium discoideum protein phosphatase 6 catalytic subunit (pppD) mRNA, complete cds blastn 18199 215 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10946399 10946399 PRJNA760904_P_NODE_849_length_813_cov_5.545946_g799_i0 PRJNA760904 849 813 5.545946 45.08854098 Heterostelium album 2086695 Evosea other_Eukaryota 337 2.0099999999999996e-87   NTclustered gi|1160575900|ref|XM_020582690.1| 670386 g799 i0 78.812 40.8683886838868 505 103 62 4 65 567 13 515 Polysphondylium pallidum PN500 Rab GTPase (rab7A), partial mRNA blastn 33226 337 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17320546 17320546 PRJNA760904_P_NODE_18894_length_244_cov_0.900585_g18837_i0 PRJNA760904 18894 244 0.900585 2.1974274 Planoprotostelium aurantium 65008 Evosea other_Eukaryota 329 9.08e-86   NTclustered gi|2367628|gb|AF016241.1| 65008 g18837 i0 91.02 96.8032786885246 245 21 100 1 1 244 437 681 Planoprotostelium aurantium protein synthesis elongation factor 1-alpha (tef2) gene, partial cds blastn 23620 329 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium aurantium
18593919 18593919 PRJNA760904_P_NODE_16175_length_248_cov_2.697143_g16118_i0 PRJNA760904 16175 248 2.697143 6.68891464 Planoprotostelium aurantium 65008 Evosea other_Eukaryota 303 5.61e-78   NTclustered gi|2367628|gb|AF016241.1| 65008 g16118 i0 88.71 95.9354838709677 248 28 100 0 1 248 142 389 Planoprotostelium aurantium protein synthesis elongation factor 1-alpha (tef2) gene, partial cds blastn 23792 303 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium aurantium
21144844 21144844 PRJNA760904_P_NODE_9037_length_298_cov_1.568889_g8980_i0 PRJNA760904 9037 298 1.568889 4.67528922 Acramoeba dendroida 633159 Evosea other_Eukaryota 237 7.12e-58   NTclustered gi|146448853|gb|EF513194.1| 633159 g8980 i0 81.507 89.496644295302 292 50 97 4 7 296 783 1072 Acramoeba dendroida elongation factor 1A (EF1A) gene, partial cds blastn 26670 237 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Acramoebidae Acramoeba Acramoeba dendroida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;