RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA760904 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13496018 13496018 PRJNA760904_P_NODE_20031_length_242_cov_0.911243_g19974_i0 PRJNA760904 20031 242 0.911243 2.20520806 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 130 9.79e-26   NTclustered gi|605060084|gb|KF874224.1| 109801 g19974 i0 87.069 49.7520661157025 116 13 48 2 1 116 346 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12040 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
14771135 14771135 PRJNA760904_P_NODE_17532_length_246_cov_0.890173_g17475_i0 PRJNA760904 17532 246 0.890173 2.18982558 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 69.4 2.21e-7   NTclustered gi|2729079852|ref|XM_065202341.1| 499914 g17475 i0 100 6.53658536585366 37 0 15 0 205 241 436 472 PREDICTED: Rhopilema esculentum streptococcal hemagglutinin-like (LOC135686155), partial mRNA blastn 1608 69.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;