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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA760904 · 32 ✖

analysis 1

  • blastn · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742212 742212 PRJNA760904_P_NODE_12961_length_264_cov_1.277487_g12904_i0 PRJNA760904 12961 264 1.277487 3.37256568 Mirounga leonina 9715 Chordata Chordata 95.3 3.95e-15   NTclustered gi|1851889787|ref|XM_035006648.1| 9715 g12904 i0 75.217 2.23863636363636 230 41 81 6 25 238 23 252 PREDICTED: Mirounga leonina 40S ribosomal protein SA-like (LOC118011824), mRNA blastn 591 95.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Mirounga Mirounga leonina
742233 742233 PRJNA760904_P_NODE_17801_length_246_cov_0.890173_g17744_i0 PRJNA760904 17801 246 0.890173 2.18982558 Condylura cristata 143302 Chordata Chordata 86.1 2.19e-12   NTclustered gi|830092456|ref|XM_004688622.2| 143302 g17744 i0 94.545 6.30894308943089 55 3 22 0 129 183 553 499 PREDICTED: Condylura cristata ribosomal protein L18a (RPL18A), mRNA blastn 1552 86.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Talpidae Condylura Condylura cristata
2018216 2018216 PRJNA760904_P_NODE_1222_length_694_cov_2.186795_g1168_i0 PRJNA760904 1222 694 2.186795 15.1763573 Onychomys torridus 38674 Chordata Chordata 58.4 0.001   NTclustered gi|1908014318|ref|XM_036176866.1| 38674 g1168 i0 100 0.714697406340058 31 0 4 0 355 385 1571 1541 PREDICTED: Onychomys torridus oocyte zinc finger protein XlCOF6-like (LOC118576665), mRNA blastn 496 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Onychomys Onychomys torridus
2018262 2018262 PRJNA760904_P_NODE_20702_length_241_cov_0.916667_g20645_i0 PRJNA760904 20702 241 0.916667 2.20916747 Phyllostomus discolor 89673 Chordata Chordata 108 4.56e-19   NTclustered gi|1899625880|ref|XM_028526881.2| 89673 g20645 i0 81.343 2.4149377593361 134 23 55 2 108 240 1107 975 PREDICTED: Phyllostomus discolor cyclin A1 (CCNA1), transcript variant X2, mRNA blastn 582 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus discolor
2018292 2018292 PRJNA760904_P_NODE_6582_length_341_cov_1.149254_g6525_i0 PRJNA760904 6582 341 1.149254 3.91895614 Budorcas taxicolor 37181 Chordata Chordata 52.8 0.032   NTclustered gi|2411701395|ref|XM_052648303.1| 37181 g6525 i0 100 0.0821114369501466 28 0 8 0 20 47 568 595 PREDICTED: Budorcas taxicolor RING finger protein 225 (LOC128055768), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Budorcas Budorcas taxicolor
2480437 2480437 PRJNA760904_P_NODE_8682_length_304_cov_2.000000_g8625_i0 PRJNA760904 8682 304 2 6.08 Squamata 8509 Chordata Chordata 183 9.629999999999997e-42   NTclustered gi|1487346512|ref|XM_026681671.1| 8663 g8625 i0 81.614 48.9736842105263 223 39 73 2 2 223 716 937 PREDICTED: Notechis scutatus adenosylhomocysteinase (AHCY), mRNA blastn 14888 183 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Notechis Notechis scutatus
3756717 3756717 PRJNA760904_P_NODE_2483_length_513_cov_1.634091_g2426_i0 PRJNA760904 2483 513 1.634091 8.38288683 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.8 6.45e-6   NTclustered gi|2017826694|ref|XM_040326240.1| 8407 g2426 i0 97.368 5.72904483430799 38 1 7 0 5 42 794 757 PREDICTED: Rana temporaria PR/SET domain 10 (PRDM10), transcript variant X3, mRNA blastn 2939 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Rana Rana temporaria
6308992 6308992 PRJNA760904_P_NODE_14065_length_255_cov_1.412088_g14008_i0 PRJNA760904 14065 255 1.412088 3.6008244 Mammalia 40674 Chordata Chordata 54.7 0.006   NTclustered gi|1919012563|ref|XM_036746992.1| 9337 g14008 i0 100 11.3019607843137 29 0 11 0 227 255 1467 1439 PREDICTED: Trichosurus vulpecula arrestin beta 1 (ARRB1), transcript variant X3, mRNA blastn 2882 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Diprotodontia Phalangeridae Trichosurus Trichosurus vulpecula
7120965 7120965 PRJNA760904_P_NODE_12786_length_265_cov_1.416667_g12729_i0 PRJNA760904 12786 265 1.416667 3.75416755 Heterocephalus glaber 10181 Chordata Chordata 54.7 0.007   NTclustered gi|1196802830|ref|XR_002392390.1| 10181 g12729 i0 100 0.954716981132075 29 0 11 0 178 206 333 305 PREDICTED: Heterocephalus glaber uncharacterized LOC110347661 (LOC110347661), ncRNA blastn 253 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
7120966 7120966 PRJNA760904_P_NODE_13026_length_263_cov_1.621053_g12969_i0 PRJNA760904 13026 263 1.621053 4.26336939 Nanorana parkeri 125878 Chordata Chordata 464 2.5999999999999993e-126   NTclustered gi|1072252115|ref|XM_018555498.1| 125878 g12969 i0 98.479 7.06083650190114 263 4 100 0 1 263 1460 1198 PREDICTED: Nanorana parkeri pescadillo ribosomal biogenesis factor 1 (PES1), mRNA blastn 1857 464 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dicroglossidae Nanorana Nanorana parkeri
9670688 9670688 PRJNA760904_P_NODE_2548_length_507_cov_4.269585_g2491_i0 PRJNA760904 2548 507 4.269585 21.64679595 Mesocricetus auratus 10036 Chordata Chordata 145 7.949999999999998e-30   NTclustered gi|2025793221|ref|XM_005084892.4| 10036 g2491 i0 75 11.6528599605523 340 71 66 13 80 412 533 201 PREDICTED: Mesocricetus auratus ribosomal protein L10a (Rpl10a), transcript variant X1, mRNA blastn 5908 145 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Mesocricetus Mesocricetus auratus
10133594 10133594 PRJNA760904_P_NODE_15648_length_249_cov_1.738636_g15591_i0 PRJNA760904 15648 249 1.738636 4.32920364 Mus 10088 Chordata Chordata 460 3.16e-125   NTclustered gi|756142290|gb|KP260515.1| 10090 g15591 i0 100 100 249 0 100 0 1 249 3635 3387 Mus musculus strain ME mitochondrion, complete genome blastn 24900 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
10946359 10946359 PRJNA760904_P_NODE_19949_length_242_cov_0.911243_g19892_i0 PRJNA760904 19949 242 0.911243 2.20520806 Catharus ustulatus 91951 Chordata Chordata 69.4 2.16e-7   NTclustered gi|1823434344|ref|XM_033083692.1| 91951 g19892 i0 100 1.21900826446281 37 0 17 0 1 37 2067 2031 PREDICTED: Catharus ustulatus calmodulin-regulated spectrin-associated protein 3-like (LOC117009461), partial mRNA blastn 295 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Turdidae Catharus Catharus ustulatus
11408728 11408728 PRJNA760904_P_NODE_12529_length_267_cov_1.355670_g12472_i0 PRJNA760904 12529 267 1.35567 3.6196389 Aves 8782 Chordata Chordata 73.1 1.88e-8   NTclustered gi|2664055114|ref|XM_062578817.1| 8795 g12472 i0 97.619 2.91760299625468 42 1 16 0 152 193 277 236 PREDICTED: Rhea pennata fibroin heavy chain-like (LOC134142071), mRNA blastn 779 73.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Rheiformes Rheidae Rhea Rhea pennata
12221908 12221908 PRJNA760904_P_NODE_5370_length_370_cov_1.444444_g5313_i0 PRJNA760904 5370 370 1.444444 5.3444428 Cuculus canorus 55661 Chordata Chordata 52.8 0.035   NTclustered gi|2452604574|ref|XM_054070484.1| 55661 g5313 i0 100 0.0756756756756757 28 0 8 0 312 339 163 190 PREDICTED: Cuculus canorus chromosome 6 C2orf69 homolog (C6H2orf69), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Cuculiformes Cuculidae Cuculus Cuculus canorus
12684664 12684664 PRJNA760904_P_NODE_3550_length_438_cov_11.846575_g3493_i0 PRJNA760904 3550 438 11.846575 51.8879985 Opisthokonta 33154 Chordata Chordata 228 6.549999999999998e-55   NTclustered gi|2797521514|ref|XM_068142528.1| 211600 g3493 i0 82.197 42.9474885844749 264 47 60 0 46 309 367 104 PREDICTED: Melanerpes formicivorus ring-box 1 (RBX1), mRNA blastn 18811 228 1 Eukaryota Opisthokonta Metazoa Chordata Aves Piciformes Picidae Melanerpes Melanerpes formicivorus
13496031 13496031 PRJNA760904_P_NODE_4311_length_404_cov_3.111782_g4254_i0 PRJNA760904 4311 404 3.111782 12.57159928 Xenopus laevis 8355 Chordata Chordata 187 1.02e-42   NTclustered gi|34223695|gb|AY327901.1| 8355 g4254 i0 75.744 1.08168316831683 437 70 99 22 1 403 486 52 Xenopus laevis unknown mRNA blastn 437 187 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
14771181 14771181 PRJNA760904_P_NODE_6012_length_353_cov_1.471429_g5955_i0 PRJNA760904 6012 353 1.471429 5.19414437 Spinus spinus 160760 Chordata Chordata 80.5 1.53e-10   NTclustered gi|2917655957|emb|OZ228745.1| 160760 g5955 i0 97.826 11.7082152974504 46 1 13 0 146 191 3827188 3827143 Spinus spinus genome assembly, chromosome: 28 blastn 4133 80.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Spinus Spinus spinus
14771182 14771182 PRJNA760904_P_NODE_6132_length_350_cov_1.851986_g6075_i0 PRJNA760904 6132 350 1.851986 6.481951 Camarhynchus parvulus 87175 Chordata Chordata 274 6.48e-69   NTclustered gi|1751540952|ref|XM_030970069.1| 87175 g6075 i0 82.175 57.9342857142857 331 48 93 8 13 338 947 1271 PREDICTED: Camarhynchus parvulus eukaryotic initiation factor 4A-I-like (LOC115916364), mRNA blastn 20277 274 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Thraupidae Camarhynchus Camarhynchus parvulus
16044885 16044885 PRJNA760904_P_NODE_14293_length_253_cov_1.711111_g14236_i0 PRJNA760904 14293 253 1.711111 4.32911083 Tympanuchus pallidicinctus 109042 Chordata Chordata 350 7.27e-92   NTclustered gi|2413385218|ref|XR_008204420.1| 109042 g14236 i0 91.732 3.97233201581028 254 18 100 3 1 253 8591 8842 PREDICTED: Tympanuchus pallidicinctus uncharacterized LOC128076527 (LOC128076527), transcript variant X3, ncRNA blastn 1005 350 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Tympanuchus Tympanuchus pallidicinctus
16044948 16044948 PRJNA760904_P_NODE_9593_length_291_cov_1.059633_g9536_i0 PRJNA760904 9593 291 1.059633 3.08353203 Suncus etruscus 109475 Chordata Chordata 56.5 0.002   NTclustered gi|2280018601|ref|XM_049771758.1| 109475 g9536 i0 90.909 0.151202749140893 44 1 15 1 36 79 791 751 PREDICTED: Suncus etruscus HMG-box containing 4 (HMGXB4), mRNA blastn 44 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Soricidae Suncus Suncus etruscus
17320586 17320586 PRJNA760904_P_NODE_5934_length_355_cov_1.613475_g5877_i0 PRJNA760904 5934 355 1.613475 5.72783625 Chiloscyllium plagiosum 36176 Chordata Chordata 56.5 0.003   NTclustered gi|2096761524|ref|XM_043688388.1| 36176 g5877 i0 100 1.07887323943662 30 0 8 0 1 30 700 729 PREDICTED: Chiloscyllium plagiosum pleiomorphic adenoma gene 1 (plag1), transcript variant X1, mRNA blastn 383 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Orectolobiformes Hemiscylliidae Chiloscyllium Chiloscyllium plagiosum
17320595 17320595 PRJNA760904_P_NODE_6914_length_334_cov_1.505747_g6857_i0 PRJNA760904 6914 334 1.505747 5.02919498 Hypanus sabinus 79690 Chordata Chordata 200 1.06e-46   NTclustered gi|2587075824|ref|XM_059972473.1| 79690 g6857 i0 81.818 8.73652694610778 242 41 72 3 86 325 625 385 PREDICTED: Hypanus sabinus thioredoxin-like 4A (txnl4a), mRNA blastn 2918 200 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Dasyatidae Hypanus Hypanus sabinus
18593952 18593952 PRJNA760904_P_NODE_5675_length_362_cov_1.065744_g5618_i0 PRJNA760904 5675 362 1.065744 3.85799328 Branchiostoma belcheri 7741 Chordata Chordata 196 1.5e-45   NTclustered gi|1126176388|ref|XM_019764898.1| 7741 g5618 i0 83.412 17.1685082872928 211 35 58 0 42 252 867 1077 PREDICTED: Branchiostoma belcheri electron transfer flavoprotein subunit alpha, mitochondrial-like (LOC109467008), mRNA blastn 6215 196 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
19869141 19869141 PRJNA760904_P_NODE_1996_length_560_cov_4.190965_g1940_i0 PRJNA760904 1996 560 4.190965 23.469404 Geotrypetes seraphini 260995 Chordata Chordata 56.5 0.004   NTclustered gi|1835619033|ref|XM_033921008.1| 260995 g1940 i0 90.476 0.075 42 4 8 0 235 276 1935 1894 PREDICTED: Geotrypetes seraphini mex-3 RNA binding family member B (MEX3B), mRNA blastn 42 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Gymnophiona Dermophiidae Geotrypetes Geotrypetes seraphini
20331387 20331387 PRJNA760904_P_NODE_21036_length_237_cov_2.426829_g20979_i0 PRJNA760904 21036 237 2.426829 5.75158473 Aves 8782 Chordata Chordata 135 2.0500000000000003e-27   NTclustered gi|2458746045|ref|XM_054224410.1| 75485 g20979 i0 81.287 19.3628691983122 171 28 71 4 69 237 123 291 PREDICTED: Rissa tridactyla ribosomal protein L23 (RPL23), mRNA blastn 4589 135 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Laridae Rissa Rissa tridactyla
20331409 20331409 PRJNA760904_P_NODE_7856_length_317_cov_1.241803_g7799_i0 PRJNA760904 7856 317 1.241803 3.93651551 Mammalia 40674 Chordata Chordata 67.6 1.06e-6   NTclustered gi|2177302260|ref|XM_045820451.1| 9423 g7799 i0 100 18.2555205047319 36 0 11 0 70 105 1905 1870 PREDICTED: Phyllostomus hastatus dentin sialophosphoprotein (LOC123806966), mRNA blastn 5787 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus hastatus
21144797 21144797 PRJNA760904_P_NODE_20017_length_242_cov_0.911243_g19960_i0 PRJNA760904 20017 242 0.911243 2.20520806 Nanorana parkeri 125878 Chordata Chordata 403 5.22e-108   NTclustered gi|1072281247|ref|XM_018571291.1| 125878 g19960 i0 96.694 4.48347107438016 242 8 100 0 1 242 170 411 PREDICTED: Nanorana parkeri hemoglobin subunit beta-like (LOC108799436), mRNA blastn 1085 403 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dicroglossidae Nanorana Nanorana parkeri
22419597 22419597 PRJNA760904_P_NODE_8098_length_313_cov_1.333333_g8041_i0 PRJNA760904 8098 313 1.333333 4.17333229 Manacus candei 415023 Chordata Chordata 52.8 0.029   NTclustered gi|2325437627|ref|XR_007907874.1| 415023 g8041 i0 96.875 2.96485623003195 32 0 10 1 128 159 1848 1878 PREDICTED: Manacus candei WAS/WASL-interacting protein family member 3-like (LOC127480387), transcript variant X25, misc_RNA blastn 928 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Pipridae Manacus Manacus candei
23695227 23695227 PRJNA760904_P_NODE_7779_length_318_cov_1.257143_g7722_i0 PRJNA760904 7779 318 1.257143 3.99771474 Hippopotamus amphibius 9833 Chordata Chordata 104 8.11e-18   NTclustered gi|2528648236|ref|XM_057710526.1| 575201 g7722 i0 84.112 1.4937106918239 107 17 34 0 1 107 339 445 PREDICTED: Hippopotamus amphibius kiboko ribosomal protein S15 (RPS15), mRNA blastn 475 104 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Hippopotamidae Hippopotamus Hippopotamus amphibius
25431586 25431586 PRJNA760904_P_NODE_12880_length_264_cov_2.303665_g12823_i0 PRJNA760904 12880 264 2.303665 6.0816756 Anatidae 8830 Chordata Chordata 67.6 8.61e-7   NTclustered gi|2921976031|gb|CP130401.1| 8855 g12823 i0 86.885 3.18560606060606 61 6 23 2 181 240 4355788 4355729 Cairina moschata breed yongchun chromosome 23 blastn 841 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Anseriformes Anatidae Cairina Cairina moschata
25431623 25431623 PRJNA760904_P_NODE_8980_length_299_cov_1.362832_g8923_i0 PRJNA760904 8980 299 1.362832 4.07486768 Mus 10088 Chordata Chordata 553 6.25e-153   NTclustered gi|846388176|dbj|LC062059.1| 10090 g8923 i0 100 100 299 0 100 0 1 299 555 257 Mus musculus mitochondrion DNA, including Cytb, tRNA-Tyr, tRNA-Pro, tRNA-Phe, 12S rRNA genes and D-loop, complete sequence, sequence_id: (14446..634)_12 blastn 29900 553 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;