RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA760904 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742241 742241 PRJNA760904_P_NODE_19781_length_242_cov_1.644970_g19724_i0 PRJNA760904 19781 242 1.64497 3.9808274 Herpetosiphon aurantiacus 65 Bacteria Bacteria 97.1 9.93e-16   NTclustered gi|159889572|gb|CP000875.1| 316274 g19724 i0 84.536 1.20247933884298 97 15 40 0 1 97 5100200 5100104 Herpetosiphon aurantiacus DSM 785, complete genome blastn 291 97.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
17320529 17320529 PRJNA760904_P_NODE_15414_length_250_cov_0.870056_g15357_i0 PRJNA760904 15414 250 0.870056 2.17514 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 457 4.1099999999999985e-124   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g15357 i0 99.6 1 250 1 100 0 1 250 2161678 2161927 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 250 457 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;