RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA760904 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3293498 3293498 PRJNA760904_P_NODE_1443_length_649_cov_1.661458_g1389_i0 PRJNA760904 1443 649 1.661458 10.78286242 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.018   NTclustered gi|915015518|ref|XM_013397190.1| 5801 g1389 i0 100 0.0446841294298921 29 0 4 0 166 194 581 553 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
7120977 7120977 PRJNA760904_P_NODE_15546_length_250_cov_0.870056_g15489_i0 PRJNA760904 15546 250 0.870056 2.17514 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 220 5.87e-53   NTclustered gi|1673114077|ref|XM_029362287.1| 94643 g15489 i0 87.5 7.516 192 22 76 2 58 248 362 552 Besnoitia besnoiti putative eukaryotic initiation factor-2 gamma (BESB_037010), partial mRNA blastn 1879 220 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
14771112 14771112 PRJNA760904_P_NODE_1332_length_670_cov_1.264657_g1278_i0 PRJNA760904 1332 670 1.264657 8.4732019 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 671 0   NTclustered gi|669201650|ref|XM_008627601.1| 54757 g1278 i0 85 88.3701492537313 660 99 99 0 10 669 1344 685 Plasmodium vinckei vinckei alpha tubulin 1, putative (PVVCY_0502340), partial mRNA blastn 59208 671 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
18593901 18593901 PRJNA760904_P_NODE_13135_length_262_cov_1.629630_g13078_i0 PRJNA760904 13135 262 1.62963 4.2696306 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|916511155|ref|XM_013500323.1| 44415 g13078 i0 96.97 0.354961832061069 33 1 13 0 83 115 4207 4239 Eimeria mitis uncharacterized protein (EMH_0015160), partial mRNA blastn 93 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;