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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA760904" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA760904 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742250 742250 PRJNA760904_P_NODE_2221_length_539_cov_2.212446_g2165_i0 PRJNA760904 2221 539 2.212446 11.92508394 Chlamydomonas reinhardtii 3055 Plants Plants 226 2.9499999999999995e-54   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g2165 i0 79.688 14.7736549165121 320 60 59 5 77 394 475 159 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 7963 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7582951 7582951 PRJNA760904_P_NODE_1566_length_625_cov_2.153986_g1512_i0 PRJNA760904 1566 625 2.153986 13.4624125 Chlamydomonas 3052 Plants Plants 315 7.16e-81   NTclustered gi|2082260397|ref|XM_043068042.1| 3055 g1512 i0 77.632 28.2992 532 109 84 10 61 587 1497 971 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g498600v5), mRNA blastn 17687 315 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9670709 9670709 PRJNA760904_P_NODE_7748_length_318_cov_3.004082_g7691_i0 PRJNA760904 7748 318 3.004082 9.55298076 Monoraphidium neglectum 145388 Plants Plants 196 1.3e-45   NTclustered gi|926773763|ref|XM_014039902.1| 145388 g7691 i0 79.208 6.05974842767296 303 47 93 14 3 297 295 1 Monoraphidium neglectum 60S ribosomal protein L19-2 mRNA blastn 1927 196 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11408769 11408769 PRJNA760904_P_NODE_6589_length_341_cov_0.940299_g6532_i0 PRJNA760904 6589 341 0.940299 3.20641959 Eukaryota 2759 Plants Plants 56.5 0.002   NTclustered gi|2082241839|ref|XM_043060656.1| 3055 g6532 i0 94.444 0.6158357771261 36 2 11 0 254 289 441 406 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g158900v5), mRNA blastn 210 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13495970 13495970 PRJNA760904_P_NODE_11171_length_278_cov_1.126829_g11114_i0 PRJNA760904 11171 278 1.126829 3.13258462 Coccomyxa subellipsoidea 248742 Plants Plants 211 3.9900000000000002e-50   NTclustered gi|545373285|ref|XM_005650966.1| 574566 g11114 i0 80.645 7.70863309352518 279 48 99 3 1 276 2937 2662 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 2143 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
13958961 13958961 PRJNA760904_P_NODE_18731_length_244_cov_0.900585_g18674_i0 PRJNA760904 18731 244 0.900585 2.1974274 Eukaryota 2759 Plants Plants 246 9.409999999999999e-61   NTclustered gi|2082258180|ref|XM_043067316.1| 3055 g18674 i0 89.637 120.172131147541 193 20 79 0 52 244 823 1015 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467567v5), mRNA blastn 29322 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17320500 17320500 PRJNA760904_P_NODE_10154_length_286_cov_1.352113_g10097_i0 PRJNA760904 10154 286 1.352113 3.86704318 Chlamydomonas reinhardtii 3055 Plants Plants 165 3.25e-36   NTclustered gi|2082235647|ref|XM_001702061.2| 3055 g10097 i0 79.498 29.2937062937063 239 43 83 6 51 286 1515 1280 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g004300v5), mRNA blastn 8378 165 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17320533 17320533 PRJNA760904_P_NODE_16294_length_248_cov_1.365714_g16237_i0 PRJNA760904 16294 248 1.365714 3.38697072 Auxenochlorella protothecoides 3075 Plants Plants 246 9.59e-61   NTclustered gi|760439218|ref|XM_011398376.1| 3075 g16237 i0 86.818 53.9233870967742 220 29 89 0 29 248 214 433 Auxenochlorella protothecoides 40S ribosomal protein S15 partial mRNA blastn 13373 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
19869147 19869147 PRJNA760904_P_NODE_21316_length_226_cov_4.000000_g21259_i0 PRJNA760904 21316 226 4 9.04 Chlamydomonas reinhardtii 3055 Plants Plants 102 1.97e-17   NTclustered gi|2082267188|ref|XM_043070972.1| 3055 g21259 i0 79.054 3.04867256637168 148 31 65 0 79 226 126 273 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g660150v5), mRNA blastn 689 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19869161 19869161 PRJNA760904_P_NODE_4456_length_399_cov_1.297546_g4399_i0 PRJNA760904 4456 399 1.297546 5.17720854 Chlorella variabilis 554065 Plants Plants 278 5.7900000000000006e-70   NTclustered gi|552841589|ref|XM_005850287.1| 554065 g4399 i0 84.452 53.3959899749373 283 42 71 2 105 386 1036 755 Chlorella variabilis hypothetical protein (CHLNCDRAFT_30080) mRNA, partial cds blastn 21305 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
22882675 22882675 PRJNA760904_P_NODE_17078_length_247_cov_0.885057_g17021_i0 PRJNA760904 17078 247 0.885057 2.18609079 Eukaryota 2759 Plants Plants 62.1 3.71e-5   NTclustered gi|2082243232|ref|XM_043061198.1| 3055 g17021 i0 94.872 24.2307692307692 39 2 16 0 35 73 3315 3353 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g192400v5), mRNA blastn 5985 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23695168 23695168 PRJNA760904_P_NODE_15919_length_249_cov_0.875000_g15862_i0 PRJNA760904 15919 249 0.875 2.17875 Chlamydomonas reinhardtii 3055 Plants Plants 176 1.28e-39   NTclustered gi|2082247499|ref|XM_043062974.1| 3055 g15862 i0 81.034 13.578313253012 232 35 93 7 11 242 1556 1778 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g273300v5), mRNA blastn 3381 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;