RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA758770" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758770 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3291940 3291940 PRJNA758770_S_NODE_26823_length_249_cov_0.886364_g26697_i0 PRJNA758770 26823 249 0.886364 2.20704636 uncultured Mycoplasmatota bacterium 658143 Bacteria Bacteria 215 2.72e-51   NTclustered gi|2187152065|emb|OV788643.1| 658143 g26697 i0 84.722 31.7068273092369 216 31 86 2 13 227 722414 722200 uncultured Tenericutes bacterium isolate min17_bin32 genome assembly, chromosome: 1 blastn 7895 215 1 Bacteria   Bacillati Mycoplasmatota         uncultured Mycoplasmatota bacterium
16507578 16507578 PRJNA758770_S_NODE_23253_length_253_cov_1.061111_g23127_i0 PRJNA758770 23253 253 1.061111 2.68461083 Bacillati 1783272 Bacteria Bacteria 174 4.7e-39   NTclustered gi|2187152065|emb|OV788643.1| 658143 g23127 i0 79.6 1.96442687747036 250 45 98 6 1 247 748893 749139 uncultured Tenericutes bacterium isolate min17_bin32 genome assembly, chromosome: 1 blastn 497 174 1 Bacteria   Bacillati Mycoplasmatota         uncultured Mycoplasmatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;