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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758398 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2015594 2015594 PRJNA758398_S_NODE_16082_length_248_cov_1.633166_g15941_i0 PRJNA758398 16082 248 1.633166 4.05025168 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 331 2.57e-86   NTclustered gi|62362203|gb|AY942841.1| 317012 g15941 i0 92.609 0.92741935483871 230 17 93 0 19 248 220 449 Philodina sp. NPS-2005 guanine nucleotide binding protein beta polypeptide 2-like 1 mRNA, partial cds blastn 230 331 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
2015978 2015978 PRJNA758398_S_NODE_5022_length_424_cov_1.360000_g4881_i0 PRJNA758398 5022 424 1.36 5.7664 Philodina roseola 96448 Rotifera other_Eukaryota 470 9.52e-128   NTclustered gi|183178949|gb|EU432548.1| 96448 g4881 i0 86.667 2.85849056603774 435 45 99 9 2 424 40710 40277 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 1212 470 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7118701 7118701 PRJNA758398_S_NODE_43626_length_166_cov_1.521368_g43485_i0 PRJNA758398 43626 166 1.521368 2.52547088 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 202 1.2999999999999998e-47   NTclustered gi|402761779|gb|JX184021.1| 104788 g43485 i0 88.554 41.0481927710843 166 19 100 0 1 166 676 841 Macrotrachela quadricornifera isolate HR cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 6814 202 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
7118841 7118841 PRJNA758398_S_NODE_7846_length_343_cov_2.040816_g7705_i0 PRJNA758398 7846 343 2.040816 6.99999888 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 396 1.3e-105   NTclustered gi|62362199|gb|AY942839.1| 317012 g7705 i0 88.415 16.6618075801749 328 34 94 3 3 326 365 38 Philodina sp. NPS-2005 S14e ribosomal protein-like protein mRNA, complete cds blastn 5715 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
8392908 8392908 PRJNA758398_S_NODE_22067_length_218_cov_3.017751_g21926_i0 PRJNA758398 22067 218 3.017751 6.57869718 Adineta ricciae 249248 Rotifera other_Eukaryota 207 3.89e-49   NTclustered gi|403492564|gb|JX193021.1| 249248 g21926 i0 89.571 14.9357798165138 163 17 75 0 54 216 1019 857 Adineta ricciae isolate AU.1.2 alpha tubulin gene, partial cds blastn 3256 207 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
9668248 9668248 PRJNA758398_S_NODE_29708_length_195_cov_1.047945_g29567_i0 PRJNA758398 29708 195 1.047945 2.04349275 Philodina roseola 96448 Rotifera other_Eukaryota 145 2.7e-30   NTclustered gi|183178949|gb|EU432548.1| 96448 g29567 i0 84.459 17.4871794871795 148 21 75 2 5 151 39381 39527 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 3410 145 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
17318225 17318225 PRJNA758398_S_NODE_51014_length_162_cov_2.132743_g50873_i0 PRJNA758398 51014 162 2.132743 3.45504366 Adineta vaga 104782 Rotifera other_Eukaryota 171 3.57e-38   NTclustered gi|403492629|gb|JX193053.1| 104782 g50873 i0 86.076 1.97530864197531 158 22 98 0 2 159 557 714 Adineta vaga isolate BE1C1 alpha tubulin gene, partial cds blastn 320 171 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
19866590 19866590 PRJNA758398_S_NODE_276_length_1365_cov_5.381459_g236_i0 PRJNA758398 276 1365 5.381459 73.45691535 Habrotrocha constricta 104786 Rotifera other_Eukaryota 1637 0   NTclustered gi|402761741|gb|JX184002.1| 104786 g236 i0 88.343 43.8498168498168 1364 157 99 2 3 1365 175 1537 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 59855 1637 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
19866685 19866685 PRJNA758398_S_NODE_34216_length_183_cov_1.522388_g34075_i0 PRJNA758398 34216 183 1.522388 2.78597004 Adineta ricciae 249248 Rotifera other_Eukaryota 224 3.1199999999999996e-54   NTclustered gi|403492558|gb|JX193018.1| 249248 g34075 i0 89.326 26.0928961748634 178 19 97 0 2 179 571 748 Adineta ricciae isolate AU.1.2 alpha tubulin gene, partial cds blastn 4775 224 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
20330818 20330818 PRJNA758398_S_NODE_3076_length_539_cov_2.446939_g2938_i0 PRJNA758398 3076 539 2.446939 13.18900121 Eurotatoria 2816136 Rotifera other_Eukaryota 606 9.009999999999996e-169   NTclustered gi|402761787|gb|JX184025.1| 104782 g2938 i0 87.406 22.7384044526902 532 61 98 5 11 539 38 566 Adineta vaga cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 12256 608 0.996710526315789 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
21142078 21142078 PRJNA758398_S_NODE_1537_length_727_cov_13.533923_g1424_i0 PRJNA758398 1537 727 13.533923 98.39162021 Philodina citrina 468664 Rotifera other_Eukaryota 828 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g1424 i0 87.904 21.6341127922971 711 76 97 7 1 706 1694 2399 Philodina citrina complete mitochondrial genome blastn 15728 828 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
21142427 21142427 PRJNA758398_S_NODE_41817_length_167_cov_1.533898_g41676_i0 PRJNA758398 41817 167 1.533898 2.56160966 Philodina roseola 96448 Rotifera other_Eukaryota 169 1.33e-37   NTclustered gi|209867641|gb|EU637019.1| 96448 g41676 i0 85.03 54.2994011976048 167 24 99 1 2 167 27019 27185 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 9068 169 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
22417138 22417138 PRJNA758398_S_NODE_32838_length_186_cov_4.226277_g32697_i0 PRJNA758398 32838 186 4.226277 7.86087522 Habrotrocha constricta 104786 Rotifera other_Eukaryota 267 5.22e-67   NTclustered gi|402761741|gb|JX184002.1| 104786 g32697 i0 92.473 85.8763440860215 186 14 100 0 1 186 203 18 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 15973 267 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
23692743 23692743 PRJNA758398_S_NODE_3559_length_502_cov_3.567329_g3418_i0 PRJNA758398 3559 502 3.567329 17.90799158 Philodina citrina 468664 Rotifera other_Eukaryota 440 8.959999999999997e-119   NTclustered gi|407227484|emb|FR856884.1| 468664 g3418 i0 83.403 10.5876494023904 476 78 95 1 1 476 9824 10298 Philodina citrina complete mitochondrial genome blastn 5315 440 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;