RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17318238 17318238 PRJNA758398_S_NODE_52754_length_162_cov_0.902655_g52613_i0 PRJNA758398 52754 162 0.902655 1.4623011 Dysidea avara 196820 Porifera other_Eukaryota 71.3 3.72e-8   NTclustered gi|2749575309|ref|XM_066053982.1| 196820 g52613 i0 93.617 0.290123456790123 47 3 29 0 94 140 1471 1425 PREDICTED: Dysidea avara protein DD3-3-like (LOC136260299), mRNA blastn 47 71.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
22882067 22882067 PRJNA758398_S_NODE_36718_length_178_cov_1.015504_g36577_i0 PRJNA758398 36718 178 1.015504 1.80759712 Opisthokonta 33154 Porifera other_Eukaryota 60.2 9e-5   NTclustered gi|2732926220|ref|XM_065330107.1| 27933 g36577 i0 97.143 18.561797752809 35 1 20 0 59 93 1361 1327 PREDICTED: Sycon ciliatum uncharacterized LOC135817004 (LOC135817004), partial mRNA blastn 3304 60.2 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;