RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758398 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
739691 739691 PRJNA758398_S_NODE_29481_length_195_cov_1.678082_g29340_i0 PRJNA758398 29481 195 1.678082 3.2722599 Choeradoplana gladismariae 1334121 Platyhelminthes Platyhelminthes 99 2.13e-16   NTclustered gi|526130001|gb|KC614528.1| 1334121 g29340 i0 82.569 10.3897435897436 109 19 56 0 6 114 502 610 Choeradoplana gladismariae voucher MZUSP PL 1003 elongation factor 1-alpha (EF 1-alpha) gene, partial cds blastn 2026 99 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Geoplanidae Choeradoplana Choeradoplana gladismariae
4568143 4568143 PRJNA758398_S_NODE_33084_length_186_cov_1.116788_g32943_i0 PRJNA758398 33084 186 1.116788 2.07722568 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 76.8 9.44e-10   NTclustered gi|2318749084|ref|XM_051210484.1| 6185 g32943 i0 94 0.268817204301075 50 3 27 0 13 62 4245 4294 Schistosoma haematobium Dynein heavy chain 1, axonemal (DNAH1), mRNA blastn 50 76.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
6308442 6308442 PRJNA758398_S_NODE_34385_length_183_cov_1.141791_g34244_i0 PRJNA758398 34385 183 1.141791 2.08947753 Metazoa 33208 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|226466839|emb|FN313821.1| 6182 g34244 i0 100 1.68306010928962 29 0 16 0 145 173 1345 1373 Schistosoma japonicum isolate Anhui full length mRNA clone SJFCA0420|FSA001-P00019-A05, complete sequence blastn 308 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10944168 10944168 PRJNA758398_S_NODE_7629_length_348_cov_1.227425_g7488_i0 PRJNA758398 7629 348 1.227425 4.271439 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 394 4.75e-105   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g7488 i0 92.446 20.5862068965517 278 18 80 3 72 348 683 408 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 7164 394 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
13493306 13493306 PRJNA758398_S_NODE_14211_length_262_cov_1.338028_g14070_i0 PRJNA758398 14211 262 1.338028 3.50563336 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 279 1.01e-70   NTclustered gi|62199105|gb|AY967475.1| 79327 g14070 i0 85.878 64.030534351145 262 37 100 0 1 262 664 403 Schmidtea mediterranea clone HE.1.03G mRNA sequence blastn 16776 279 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
17318171 17318171 PRJNA758398_S_NODE_46334_length_165_cov_0.879310_g46193_i0 PRJNA758398 46334 165 0.87931 1.4508615 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.001   NTclustered gi|690627133|emb|LN171496.1| 99802 g46193 i0 88.889 0.272727272727273 45 5 27 0 119 163 1268 1224 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0151891 blastn 45 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21142114 21142114 PRJNA758398_S_NODE_17957_length_237_cov_1.590426_g17816_i0 PRJNA758398 17957 237 1.590426 3.76930962 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 274 4.17e-69   NTclustered gi|68479954|gb|DQ076149.1| 6182 g17816 i0 89.401 0.915611814345992 217 23 92 0 1 217 39 255 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 217 274 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;