RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9668252 9668252 PRJNA758398_S_NODE_30208_length_193_cov_1.770833_g30067_i0 PRJNA758398 30208 193 1.770833 3.41770769 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.94e-5   NTclustered gi|294939297|ref|XM_002782354.1| 423536 g30067 i0 90.909 0.227979274611399 44 4 23 0 40 83 165 122 Perkinsus marinus ATCC 50983 centrin, putative, mRNA blastn 44 60.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
14768917 14768917 PRJNA758398_S_NODE_54112_length_161_cov_0.910714_g53971_i0 PRJNA758398 54112 161 0.910714 1.46624954 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 111 2.18e-20   NTclustered gi|294874491|ref|XM_002766937.1| 423536 g53971 i0 83.471 57.1180124223603 121 18 75 2 42 161 129 248 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 9196 111 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;