RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Nucleocytoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758398 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4567968 4567968 PRJNA758398_S_NODE_18524_length_234_cov_1.378378_g18383_i0 PRJNA758398 18524 234 1.378378 3.22540452 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 132 2.62e-26   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g18383 i0 79.208 0.863247863247863 202 32 84 9 19 215 773747 773551 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 202 132 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
4568235 4568235 PRJNA758398_S_NODE_404_length_1214_cov_13.658369_g358_i0 PRJNA758398 404 1214 13.658369 165.81259966 Fadolivirus algeromassiliense 3060017 Viruses Viruses 75 2.64e-8   NTclustered gi|2500384359|ref|NC_077067.1| 3060017 g358 i0 97.674 0.150741350906096 43 1 4 0 715 757 465857 465899 Fadolivirus 1 strain FV1/VV64, partial genome blastn 183 75 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
6308446 6308446 PRJNA758398_S_NODE_39345_length_172_cov_1.406504_g39204_i0 PRJNA758398 39345 172 1.406504 2.41918688 Mimivirus 315393 Viruses Viruses 54.7 0.004   NTclustered gi|2267817464|gb|MW685904.1| 212035 g39204 i0 94.286 2.37209302325581 35 2 20 0 79 113 295752 295786 Acanthamoeba polyphaga mimivirus isolate M4, complete genome blastn 408 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
10943915 10943915 PRJNA758398_S_NODE_34469_length_183_cov_0.977612_g34328_i0 PRJNA758398 34469 183 0.977612 1.78902996 Hokovirus HKV1 1977638 Viruses Viruses 150 5.37e-32   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g34328 i0 89.831 0.644808743169399 118 10 64 2 25 141 148714 148830 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 118 150 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
13493855 13493855 PRJNA758398_S_NODE_9991_length_306_cov_2.143969_g9850_i0 PRJNA758398 9991 306 2.143969 6.56054514 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.008   NTclustered gi|2309594316|gb|OP536747.1| 10244 g9850 i0 100 9.47712418300654 29 0 9 0 65 93 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
21142477 21142477 PRJNA758398_S_NODE_47417_length_164_cov_1.330435_g47276_i0 PRJNA758398 47417 164 1.330435 2.1819134 Tupanvirus salinum 3060758 Viruses Viruses 56.5 0.001   NTclustered gi|2500358058|ref|NC_075039.1| 2126985 g47276 i0 90.476 0.25609756097561 42 4 26 0 36 77 699101 699060 Tupanvirus soda lake, partial genome blastn 42 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;