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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA758398 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
739812 739812 PRJNA758398_S_NODE_4021_length_472_cov_1.683215_g3880_i0 PRJNA758398 4021 472 1.683215 7.9447748 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 241 9.13e-59   NTclustered gi|302563026|dbj|AB546336.1| 39717 g3880 i0 76.724 71.3728813559322 464 88 96 18 1 454 820 1273 Paulinella chromatophora EF-1a mRNA for elongation factor 1alpha, partial cds blastn 33688 241 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
739836 739836 PRJNA758398_S_NODE_42481_length_167_cov_0.864407_g42340_i0 PRJNA758398 42481 167 0.864407 1.44355969 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 243 7.739999999999999e-60   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g42340 i0 95.973 99.311377245509 149 6 89 0 1 149 3701 3849 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16585 243 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
3290844 3290844 PRJNA758398_S_NODE_20483_length_225_cov_1.448864_g20342_i0 PRJNA758398 20483 225 1.448864 3.259944 Bodomorpha sp. Panama105 555789 SAR_Eukaryotes SAR_Eukaryotes 411 2.869999999999999e-110   NTclustered gi|219524917|gb|EU709280.1| 555789 g20342 i0 99.556 83.8266666666667 225 1 100 0 1 225 1369 1593 Bodomorpha sp. Panama105 18S ribosomal RNA gene, partial sequence blastn 18861 411 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. Panama105
3291177 3291177 PRJNA758398_S_NODE_47203_length_164_cov_2.234783_g47062_i0 PRJNA758398 47203 164 2.234783 3.66504412 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 287 3.45e-73   NTclustered gi|238617602|gb|FJ973377.1| 188950 g47062 i0 98.182 16.5548780487805 165 2 100 1 1 164 549 385 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 2715 287 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5843514 5843514 PRJNA758398_S_NODE_55065_length_157_cov_3.907407_g54924_i0 PRJNA758398 55065 157 3.907407 6.13462899 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 195 2.03e-45   NTclustered gi|238617630|gb|FJ973394.1| 188950 g54924 i0 96.581 68.5095541401274 117 4 75 0 41 157 190 74 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 10756 195 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
7118538 7118538 PRJNA758398_S_NODE_30226_length_193_cov_1.770833_g30085_i0 PRJNA758398 30226 193 1.770833 3.41770769 Massisteria marina 127229 SAR_Eukaryotes SAR_Eukaryotes 145 2.6699999999999997e-30   NTclustered gi|302026190|gb|GQ377684.1| 127229 g30085 i0 81.977 2.30051813471503 172 30 89 1 19 190 188 18 Massisteria marina HSP90 gene, partial cds blastn 444 145 1 Eukaryota Sar   Cercozoa     Massisteriidae Massisteria Massisteria marina
7118762 7118762 PRJNA758398_S_NODE_50646_length_163_cov_0.894737_g50505_i0 PRJNA758398 50646 163 0.894737 1.45842131 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 76.8 8.06e-10   NTclustered gi|27734338|gb|AY099124.1| 1561963 g50505 i0 91.228 0.349693251533742 57 4 34 1 63 118 49 105 Lotharella amoeboformis isolate pub4 polyubiquitin gene, partial cds blastn 57 76.8 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
10943622 10943622 PRJNA758398_S_NODE_14629_length_258_cov_3.516746_g14488_i0 PRJNA758398 14629 258 3.516746 9.07320468 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 316 7.539999999999998e-82   NTclustered gi|301014702|gb|GQ377715.1| 323453 g14488 i0 89.919 58.0271317829457 248 21 95 4 2 247 285 40 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 14971 316 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
13493668 13493668 PRJNA758398_S_NODE_4291_length_457_cov_20.553922_g4150_i0 PRJNA758398 4291 457 20.553922 93.93142354 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 802 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g4150 i0 98.886 86.9496717724289 449 5 98 0 1 449 783 335 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 39736 802 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14768586 14768586 PRJNA758398_S_NODE_24132_length_211_cov_1.679012_g23991_i0 PRJNA758398 24132 211 1.679012 3.54271532 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 390 3.459999999999999e-104   NTclustered gi|238617602|gb|FJ973377.1| 188950 g23991 i0 100 42.781990521327 211 0 100 0 1 211 2899 2689 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 9027 390 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19866520 19866520 PRJNA758398_S_NODE_216_length_1442_cov_14.035894_g181_i0 PRJNA758398 216 1442 14.035894 202.39759148 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1616 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g181 i0 99.328 68.8072122052705 893 6 62 0 518 1410 893 1 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 99220 1616 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19866915 19866915 PRJNA758398_S_NODE_5776_length_395_cov_14.890173_g5635_i0 PRJNA758398 5776 395 14.890173 58.81618335 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 466 1.14e-126   NTclustered gi|238617666|gb|FJ973412.1| 188950 g5635 i0 99.225 38.3316455696203 258 2 65 0 1 258 258 1 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 15141 466 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21142547 21142547 PRJNA758398_S_NODE_54577_length_161_cov_0.910714_g54436_i0 PRJNA758398 54577 161 0.910714 1.46624954 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 143 7.72e-30   NTclustered gi|33304713|gb|AY251793.1| 227086 g54436 i0 82.716 25.9689440993789 162 26 100 2 1 161 1283 1123 Bigelowiella natans ubiquitin/actin fusion protein 2 mRNA, complete cds blastn 4181 143 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
22416833 22416833 PRJNA758398_S_NODE_10718_length_296_cov_3.008097_g10577_i0 PRJNA758398 10718 296 3.008097 8.90396712 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 337 6.78e-88   NTclustered gi|300676716|gb|GQ377714.1| 323453 g10577 i0 88.256 66.2297297297297 281 33 95 0 3 283 59 339 Heteromita sp. PRA-74 rps22a (rps22a) mRNA, complete cds blastn 19604 337 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
24966499 24966499 PRJNA758398_S_NODE_50820_length_163_cov_0.894737_g50679_i0 PRJNA758398 50820 163 0.894737 1.45842131 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|302563026|dbj|AB546336.1| 39717 g50679 i0 100 0.521472392638037 29 0 18 0 131 159 1384 1412 Paulinella chromatophora EF-1a mRNA for elongation factor 1alpha, partial cds blastn 85 54.7 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
24966530 24966530 PRJNA758398_S_NODE_540_length_1110_cov_2.346843_g483_i0 PRJNA758398 540 1110 2.346843 26.0499573 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 656 0   NTclustered gi|300676723|gb|GQ377712.1| 323453 g483 i0 85.714 0.997297297297297 623 87 56 2 489 1110 832 211 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 1107 656 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;