RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA758398" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12219737 12219737 PRJNA758398_S_NODE_9830_length_309_cov_1.142308_g9689_i0 PRJNA758398 9830 309 1.142308 3.52973172 Attheya longicornis 451786 SAR_Eukaryotes SAR_Eukaryotes 117 1.0100000000000002e-21   NTclustered gi|2046217437|gb|MW729336.1| 451786 g9689 i0 79.878 4.49190938511327 164 29 52 4 64 224 38496 38334 Attheya longicornis mitochondrion, complete genome blastn 1388 117 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Attheyaceae Attheya Attheya longicornis
21142312 21142312 PRJNA758398_S_NODE_32857_length_186_cov_2.605839_g32716_i0 PRJNA758398 32857 186 2.605839 4.84686054 Thalassiosira pseudonana 35128 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|224008227|ref|XM_002293037.1| 296543 g32716 i0 100 0.155913978494624 29 0 16 0 158 186 560 588 Thalassiosira pseudonana CCMP1335 predicted protein mRNA blastn 29 54.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;