contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1203779 | 1203779 | PRJNA758088_P_NODE_33421_length_817_cov_1.189516_g27487_i0 | PRJNA758088 | 33421 | 817 | 1.189516 | 9.71834572 | Bacteria | 2 | Bacteria | Bacteria | 1504 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g27487 | i0 | 99.878 | 114.914320685435 | 817 | 1 | 100 | 0 | 1 | 817 | 316484 | 317300 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 93885 | 1504 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 2478995 | 2478995 | PRJNA758088_P_NODE_273022_length_255_cov_1.269231_g266051_i0 | PRJNA758088 | 273022 | 255 | 1.269231 | 3.23653905 | root | 1 | Root_unresolved | Root_unresolved | 472 | 1.5e-128 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g266051 | i0 | 100 | 121.941176470588 | 255 | 0 | 100 | 0 | 1 | 255 | 312355 | 312101 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 31095 | 472 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 5031558 | 5031558 | PRJNA758088_P_NODE_202764_length_299_cov_1.022124_g195793_i0 | PRJNA758088 | 202764 | 299 | 1.022124 | 3.05615076 | Bacteria | 2 | Bacteria | Bacteria | 553 | 6.25e-153 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g195793 | i0 | 100 | 93.6254180602007 | 299 | 0 | 100 | 0 | 1 | 299 | 314682 | 314980 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 27994 | 553 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 5841165 | 5841165 | PRJNA758088_P_NODE_339125_length_244_cov_0.900585_g332154_i0 | PRJNA758088 | 339125 | 244 | 0.900585 | 2.1974274 | Brachyspira pilosicoli | 52584 | Bacteria | Bacteria | 440 | 4.019999999999999e-119 | NTclustered | gi|2514077256|gb|CP098750.1| | 52584 | g332154 | i0 | 99.18 | 9.90983606557377 | 244 | 2 | 100 | 0 | 1 | 244 | 1683484 | 1683241 | Brachyspira pilosicoli strain ZH1243 chromosome, complete genome | blastn | 2418 | 440 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira pilosicoli | ||
| 7581577 | 7581577 | PRJNA758088_P_NODE_28266_length_909_cov_1.729665_g22821_i0 | PRJNA758088 | 28266 | 909 | 1.729665 | 15.72265485 | Bacteria | 2 | Bacteria | Bacteria | 1631 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g22821 | i0 | 99.334 | 92.2222222222222 | 901 | 6 | 99 | 0 | 1 | 901 | 322075 | 322975 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 83830 | 1642 | 0.993300852618758 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 9664653 | 9664653 | PRJNA758088_P_NODE_241428_length_274_cov_1.149254_g234457_i0 | PRJNA758088 | 241428 | 274 | 1.149254 | 3.14895596 | Treponema rectale | 744512 | Bacteria | Bacteria | 195 | 3.95e-45 | NTclustered | gi|1919550644|gb|CP031517.1| | 744512 | g234457 | i0 | 79.487 | 0.996350364963504 | 273 | 56 | 99 | 0 | 1 | 273 | 240005 | 240277 | Treponema rectale strain CHPA chromosome, complete genome | blastn | 273 | 195 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema rectale | ||
| 9665539 | 9665539 | PRJNA758088_P_NODE_301648_length_249_cov_0.875000_g294677_i0 | PRJNA758088 | 301648 | 249 | 0.875 | 2.17875 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 167 | 7.709999999999999e-37 | NTclustered | gi|2621786047|emb|OY782505.1| | 2791017 | g294677 | i0 | 82.888 | 0.751004016064257 | 187 | 30 | 75 | 2 | 41 | 226 | 2151850 | 2151665 | MAG: Sphaerochaetaceae bacterium isolate dbdf49c1-f841-4570-9102-cd3a9ce64f89 genome assembly, chromosome: 1 | blastn | 187 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 16037041 | 16037041 | PRJNA758088_P_NODE_12513_length_1477_cov_9.440883_g9473_i0 | PRJNA758088 | 12513 | 1477 | 9.440883 | 139.44184191 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 171 | 4.01e-37 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g9473 | i0 | 84.27 | 26.451591062965495 | 178 | 25 | 12 | 3 | 688 | 863 | 74549 | 74373 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 39069 | 171 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 16040062 | 16040062 | PRJNA758088_P_NODE_322193_length_246_cov_0.890173_g315222_i0 | PRJNA758088 | 322193 | 246 | 0.890173 | 2.18982558 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 198 | 2.7e-46 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g315222 | i0 | 82.805 | 11.1991869918699 | 221 | 38 | 90 | 0 | 1 | 221 | 164233 | 164453 | Treponema sp. OMZ 838, complete genome | blastn | 2755 | 198 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 16506992 | 16506992 | PRJNA758088_P_NODE_79593_length_476_cov_1.084367_g72628_i0 | PRJNA758088 | 79593 | 476 | 1.084367 | 5.16158692 | Bacteria | 2 | Bacteria | Bacteria | 880 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g72628 | i0 | 100 | 95.1008403361345 | 476 | 0 | 100 | 0 | 1 | 476 | 320476 | 320951 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 45268 | 880 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 20330454 | 20330454 | PRJNA758088_P_NODE_55036_length_593_cov_1.401923_g48226_i0 | PRJNA758088 | 55036 | 593 | 1.401923 | 8.31340339 | Bacteria | 2 | Bacteria | Bacteria | 1090 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g48226 | i0 | 99.831 | 110.414839797639 | 593 | 1 | 100 | 0 | 1 | 593 | 314051 | 314643 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 65476 | 1090 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 20330498 | 20330498 | PRJNA758088_P_NODE_64496_length_538_cov_1.402151_g57567_i0 | PRJNA758088 | 64496 | 538 | 1.402151 | 7.54357238 | Bacteria | 2 | Bacteria | Bacteria | 989 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g57567 | i0 | 99.814 | 118.998141263941 | 538 | 1 | 100 | 0 | 1 | 538 | 317981 | 317444 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 64021 | 989 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 21606303 | 21606303 | PRJNA758088_P_NODE_7797_length_1846_cov_1.530175_g5806_i0 | PRJNA758088 | 7797 | 1846 | 1.530175 | 28.2470305 | Bacteria | 2 | Bacteria | Bacteria | 3404 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g5806 | i0 | 99.946 | 81.395991332611 | 1846 | 1 | 100 | 0 | 1 | 1846 | 318390 | 320235 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 150257 | 3404 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 22881115 | 22881115 | PRJNA758088_P_NODE_25118_length_979_cov_2.200883_g20016_i0 | PRJNA758088 | 25118 | 979 | 2.200883 | 21.54664457 | root | 1 | Root_unresolved | Root_unresolved | 1808 | 0 | NTclustered | gi|1318779104|gb|CP019600.1| | 159 | g20016 | i0 | 100 | 128.73544433095 | 979 | 0 | 100 | 0 | 1 | 979 | 2036504 | 2037482 | Brachyspira hyodysenteriae strain BH718 chromosome, complete genome | blastn | 126032 | 1808 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 22881898 | 22881898 | PRJNA758088_P_NODE_99678_length_420_cov_1.726225_g92708_i0 | PRJNA758088 | 99678 | 420 | 1.726225 | 7.250145 | Bacteria | 2 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g92708 | i0 | 100 | 75.0619047619048 | 420 | 0 | 100 | 0 | 1 | 420 | 316082 | 316501 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 31526 | 776 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 24155329 | 24155329 | PRJNA758088_P_NODE_28779_length_899_cov_1.667070_g23276_i0 | PRJNA758088 | 28779 | 899 | 1.66707 | 14.9869593 | Bacteria | 2 | Bacteria | Bacteria | 1661 | 0 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g23276 | i0 | 100 | 115.202447163515 | 899 | 0 | 100 | 0 | 1 | 899 | 316081 | 315183 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 103567 | 1661 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;