RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758088 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5840219 5840219 PRJNA758088_P_NODE_278845_length_251_cov_2.264045_g271874_i0 PRJNA758088 278845 251 2.264045 5.68275295 Dactylogyrus eucalius 524036 Platyhelminthes Platyhelminthes 372 1.54e-98   NTclustered gi|189916548|gb|EU643634.1| 524036 g271874 i0 93.281 1.00796812749004 253 15 100 2 1 251 227 479 Dactylogyrus eucalius 18S ribosomal RNA gene and internal transcribed spacer, partial sequence blastn 253 372 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Dactylogyridae Dactylogyrus Dactylogyrus eucalius
10938495 10938495 PRJNA758088_P_NODE_128509_length_370_cov_2.370370_g121538_i0 PRJNA758088 128509 370 2.37037 8.770369 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 409 1.81e-109   NTclustered gi|68479954|gb|DQ076149.1| 6182 g121538 i0 88.496 0.916216216216216 339 37 91 2 33 370 12 349 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 339 409 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
11407637 11407637 PRJNA758088_P_NODE_348389_length_243_cov_0.905882_g341418_i0 PRJNA758088 348389 243 0.905882 2.20129326 Metazoa 33208 Platyhelminthes Platyhelminthes 449 6.65e-122   NTclustered gi|60600609|gb|AY810873.1| 6182 g341418 i0 100 36.9218106995885 243 0 100 0 1 243 461 219 Schistosoma japonicum clone SJCHGC07419 unknown mRNA blastn 8972 449 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
12216581 12216581 PRJNA758088_P_NODE_294290_length_250_cov_0.870056_g287319_i0 PRJNA758088 294290 250 0.870056 2.17514 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|690557732|emb|LN113281.1| 99802 g287319 i0 85.455 0.22 55 7 22 1 1 54 2692 2746 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0006997 blastn 55 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;