RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758088 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9665342 9665342 PRJNA758088_P_NODE_287568_length_250_cov_1.305085_g280597_i0 PRJNA758088 287568 250 1.305085 3.2627125 Cressdnaviricota sp. 2748378 Viruses Viruses 424 4.16e-114   NTclustered gi|2059689808|tpg|BK029432.1| 2748378 g280597 i0 97.2 4.988 250 7 100 0 1 250 13286 13037 MAG TPA_asm: Cressdnaviricota sp. isolate ctcYd7, partial genome blastn 1247 424 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
25430860 25430860 PRJNA758088_P_NODE_92480_length_438_cov_0.978082_g85510_i0 PRJNA758088 92480 438 0.978082 4.28399916 Viruses 10239 Viruses Viruses 804 0   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g85510 i0 99.772 3 438 1 100 0 1 438 100 537 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 1314 804 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;