RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758088 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2478615 2478615 PRJNA758088_P_NODE_174762_length_321_cov_0.943548_g167791_i0 PRJNA758088 174762 321 0.943548 3.02878908 Metazoa 33208 Cnidaria other_Eukaryota 60.2 1.8e-4   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g167791 i0 100 0.579439252336449 32 0 20 0 37 68 7265714 7265683 Anemonia sulcata genome assembly, chromosome: 18 blastn 186 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
7116310 7116310 PRJNA758088_P_NODE_332946_length_245_cov_0.895349_g325975_i0 PRJNA758088 332946 245 0.895349 2.19360505 Acropora muricata 159855 Cnidaria other_Eukaryota 448 2.41e-121   NTclustered gi|2784681420|ref|XM_067171025.1| 159855 g325975 i0 99.592 8.02040816326531 245 1 100 0 1 245 1916 2160 PREDICTED: Acropora muricata uncharacterized protein (LOC136898338), mRNA blastn 1965 448 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
16039842 16039842 PRJNA758088_P_NODE_308053_length_248_cov_0.880000_g301082_i0 PRJNA758088 308053 248 0.88 2.1824 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940735|emb|OZ237565.1| 6108 g301082 i0 100 0.487903225806452 29 0 12 0 50 78 8805961 8805989 Anemonia sulcata genome assembly, chromosome: 11 blastn 121 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;