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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2012528 2012528 PRJNA758088_P_NODE_262922_length_261_cov_1.228723_g255951_i0 PRJNA758088 262922 261 1.228723 3.20696703 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 333 7.589999999999999e-87   NTclustered gi|390195606|gb|JX112363.1| 151077 g255951 i0 90.196 96.4980842911877 255 25 98 0 1 255 491 745 Chilodonella uncinata strain USA_SC2 beta-tubulin (Btub) gene, partial cds; macronuclear blastn 25186 333 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2479606 2479606 PRJNA758088_P_NODE_90202_length_443_cov_8.900000_g83232_i0 PRJNA758088 90202 443 8.9 39.427 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 797 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g83232 i0 99.097 97.0744920993228 443 4 100 0 1 443 2806 2364 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43004 797 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3287629 3287629 PRJNA758088_P_NODE_25043_length_980_cov_56.401323_g19950_i0 PRJNA758088 25043 980 56.401323 552.7329654 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 977 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g19950 i0 94.488 40.2795918367347 635 33 65 2 1 634 634 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 39474 977 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3289633 3289633 PRJNA758088_P_NODE_47183_length_653_cov_4.217241_g40533_i0 PRJNA758088 47183 653 4.217241 27.53858373 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 856 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g40533 i0 91.493 8.73660030627871 623 51 95 2 22 643 626 5 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 5705 856 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
3290092 3290092 PRJNA758088_P_NODE_69323_length_515_cov_62.730769_g62371_i0 PRJNA758088 69323 515 62.730769 323.06346035 Tintinnopsis tentaculata 2448638 SAR_Eukaryotes SAR_Eukaryotes 946 0   NTclustered gi|1488100069|gb|MK036423.1| 2448638 g62371 i0 100 99.7320388349515 512 0 99 0 1 512 974 463 Tintinnopsis tentaculata isolate BY2017102402 small subunit ribosomal RNA gene, partial sequence blastn 51362 946 1 Eukaryota Sar   Ciliophora Spirotrichea Tintinnida Codonellidae Tintinnopsis Tintinnopsis tentaculata
3755031 3755031 PRJNA758088_P_NODE_207443_length_295_cov_10.495495_g200472_i0 PRJNA758088 207443 295 10.495495 30.96171025 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 351 2.4099999999999995e-92   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g200472 i0 98.492 74.0677966101695 199 3 67 0 74 272 3082 2884 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 21850 351 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
4562810 4562810 PRJNA758088_P_NODE_12384_length_1485_cov_3.512748_g9369_i0 PRJNA758088 12384 1485 3.512748 52.1643078 Laurentiella strenua 114681 SAR_Eukaryotes SAR_Eukaryotes 507 2.709999999999999e-138   NTclustered gi|1134378670|gb|KX529838.1| 114681 g9369 i0 90.331 30.6498316498317 393 28 49 6 1095 1485 4433 4049 Laurentiella strenua mitochondrion, complete genome blastn 45515 507 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Laurentiella Laurentiella strenua
4563680 4563680 PRJNA758088_P_NODE_17824_length_1214_cov_7.251534_g13768_i0 PRJNA758088 17824 1214 7.251534 88.03362276 Favella ehrenbergii 182087 SAR_Eukaryotes SAR_Eukaryotes 350 3.92e-91   NTclustered gi|1705421474|gb|MN184616.1| 182087 g13768 i0 90.53 16.3714991762768 264 25 22 0 618 881 736 999 Favella ehrenbergii isolate WR2016071901-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 19875 350 1 Eukaryota Sar   Ciliophora Spirotrichea Tintinnida Xystonellidae Favella Favella ehrenbergii
5838619 5838619 PRJNA758088_P_NODE_16945_length_1250_cov_3.919286_g13047_i0 PRJNA758088 16945 1250 3.919286 48.991075 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1927 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g13047 i0 95.522 40.4616 1206 52 96 2 2 1206 1205 1 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 50577 1927 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5839036 5839036 PRJNA758088_P_NODE_198005_length_302_cov_1.467249_g191034_i0 PRJNA758088 198005 302 1.467249 4.43109198 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 230 1.2099999999999995e-55   NTclustered gi|158347525|gb|EU047814.1| 151077 g191034 i0 94.04 52.0132450331126 151 9 99 0 1 151 260 410 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 15708 230 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8390013 8390013 PRJNA758088_P_NODE_278867_length_251_cov_2.162921_g271896_i0 PRJNA758088 278867 251 2.162921 5.42893171 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 364 2.57e-96   NTclustered gi|158347525|gb|EU047814.1| 151077 g271896 i0 92.829 90.4661354581673 251 18 100 0 1 251 306 56 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 22707 364 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8392066 8392066 PRJNA758088_P_NODE_65487_length_533_cov_1.858696_g58553_i0 PRJNA758088 65487 533 1.858696 9.90684968 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 350 1.66e-91   NTclustered gi|1389870282|gb|MH356267.1| 1654720 g58553 i0 85.97 18.0581613508443 335 37 61 7 207 532 1 334 Chilodonella piscicola strain SC small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 9625 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8392226 8392226 PRJNA758088_P_NODE_73407_length_498_cov_2.694118_g66445_i0 PRJNA758088 73407 498 2.694118 13.41670764 Euplotes vanleeuwenhoeki 2794224 SAR_Eukaryotes SAR_Eukaryotes 152 4.66e-32   NTclustered gi|2055401904|ref|NC_056101.1| 2794224 g66445 i0 77.289 0.548192771084337 273 52 54 9 155 422 18233 18500 Euplotes vanleeuwenhoeki strain KKR18 mitochondrion, complete genome blastn 273 152 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vanleeuwenhoeki
9667495 9667495 PRJNA758088_P_NODE_77648_length_482_cov_5.902200_g70684_i0 PRJNA758088 77648 482 5.9022 28.448604 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 667 0   NTclustered gi|301014695|gb|GQ377692.1| 151077 g70684 i0 92.998 53.304979253112 457 32 95 0 26 482 1 457 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 25693 667 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10940806 10940806 PRJNA758088_P_NODE_280869_length_251_cov_0.865169_g273898_i0 PRJNA758088 280869 251 0.865169 2.17157419 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 309 1.22e-79   NTclustered gi|110277428|gb|DQ662856.1| 151077 g273898 i0 89.388 26.2828685258964 245 26 98 0 2 246 302 546 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 6597 309 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12218090 12218090 PRJNA758088_P_NODE_51450_length_618_cov_3.110092_g44707_i0 PRJNA758088 51450 618 3.110092 19.22036856 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 819 0   NTclustered gi|300521444|gb|GQ377690.1| 151077 g44707 i0 90.615 8.15533980582524 618 57 100 1 1 618 932 316 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 5040 819 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16039646 16039646 PRJNA758088_P_NODE_295253_length_249_cov_1.460227_g288282_i0 PRJNA758088 295253 249 1.460227 3.63596523 Metanophrys sp. WS-2012 1198320 SAR_Eukaryotes SAR_Eukaryotes 411 3.2299999999999996e-110   NTclustered gi|390988061|gb|JN885129.1| 1198320 g288282 i0 100 89.0401606425703 222 0 89 0 1 222 222 1 Metanophrys sp. WS-2012 isolate PXM2010101302 large subunit ribsomal RNA gene, partial sequence blastn 22171 411 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Orchitophryidae Metanophrys Metanophrys sp. WS-2012
16506868 16506868 PRJNA758088_P_NODE_51573_length_617_cov_4.264706_g44830_i0 PRJNA758088 51573 617 4.264706 26.31323602 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 340 1.17e-88   NTclustered gi|1389430796|gb|MH341624.1| 1654720 g44830 i0 100 28.1880064829822 184 0 30 0 434 617 4 187 Chilodonella piscicola strain C.piscicola SC small subunit ribosomal RNA gene, partial sequence blastn 17392 340 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17313972 17313972 PRJNA758088_P_NODE_21914_length_1066_cov_324.404834_g17227_i0 PRJNA758088 21914 1066 324.404834 3458.15553044 Laackmanniella prolongata 1229648 SAR_Eukaryotes SAR_Eukaryotes 1687 0   NTclustered gi|403314493|gb|JQ924056.1| 1229648 g17227 i0 95.877 82.0497185741088 1043 41 98 2 1 1042 2809 1768 Laackmanniella prolongata isolate T97 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 87465 1687 1 Eukaryota Sar   Ciliophora Spirotrichea Tintinnida Codonellopsidae Laackmanniella Laackmanniella prolongata
17314899 17314899 PRJNA758088_P_NODE_280074_length_251_cov_1.275281_g273103_i0 PRJNA758088 280074 251 1.275281 3.20095531 Laboea strobila 181653 SAR_Eukaryotes SAR_Eukaryotes 211 3.55e-50   NTclustered gi|23957276|gb|AF399156.1| 181653 g273103 i0 91.139 61.0398406374502 158 10 63 4 58 215 539 692 Laboea strobila clone Lstr00atub_2 alpha-tubulin gene, partial cds blastn 15321 211 1 Eukaryota Sar   Ciliophora Spirotrichea   Strombidiidae Laboea Laboea strobila
17781691 17781691 PRJNA758088_P_NODE_55134_length_592_cov_2.053950_g48324_i0 PRJNA758088 55134 592 2.05395 12.159384 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 148 7.259999999999999e-31   NTclustered gi|2651357788|gb|PP174303.1| 41631 g48324 i0 87.597 20.2483108108108 129 15 22 1 262 390 3843 3716 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11987 148 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
18586750 18586750 PRJNA758088_P_NODE_159135_length_335_cov_1.080153_g152164_i0 PRJNA758088 159135 335 1.080153 3.61851255 Laurentiella strenua 114681 SAR_Eukaryotes SAR_Eukaryotes 97.1 1.44e-15   NTclustered gi|1134378670|gb|KX529838.1| 114681 g152164 i0 90.411 0.217910447761194 73 7 22 0 121 193 22541 22613 Laurentiella strenua mitochondrion, complete genome blastn 73 97.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Laurentiella Laurentiella strenua
18590799 18590799 PRJNA758088_P_NODE_82175_length_467_cov_1.456853_g75206_i0 PRJNA758088 82175 467 1.456853 6.80350351 Oxytricha trifallax 1172189 SAR_Eukaryotes SAR_Eukaryotes 132 5.67e-26   NTclustered gi|612176403|gb|KJ573497.1| 1172189 g75206 i0 90.196 29.7858672376874 102 9 22 1 188 288 5044 4943 Oxytricha trifallax strain JRB310 rDNA gene locus, partial sequence; micronuclear blastn 13910 132 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha trifallax
19861056 19861056 PRJNA758088_P_NODE_102616_length_414_cov_1.219941_g95646_i0 PRJNA758088 102616 414 1.219941 5.05055574 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 582 1.14e-161   NTclustered gi|110277428|gb|DQ662856.1| 151077 g95646 i0 92.029 89.5676328502416 414 33 100 0 1 414 1423 1010 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 37081 582 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19862650 19862650 PRJNA758088_P_NODE_207356_length_296_cov_0.919283_g200385_i0 PRJNA758088 207356 296 0.919283 2.72107768 Cyclotrichium cyclokaryon 696133 SAR_Eukaryotes SAR_Eukaryotes 283 8.949999999999999e-72   NTclustered gi|375305436|gb|JF975396.1| 696133 g200385 i0 89.035 63.1452702702703 228 25 77 0 69 296 1715 1488 Cyclotrichium cyclokaryon isolate LWW07111501 28S ribosomal RNA gene, partial sequence blastn 18691 283 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Didiniidae Cyclotrichium Cyclotrichium cyclokaryon
19862944 19862944 PRJNA758088_P_NODE_22896_length_1037_cov_4.957469_g18082_i0 PRJNA758088 22896 1037 4.957469 51.40895353 Laurentiella strenua 114681 SAR_Eukaryotes SAR_Eukaryotes 477 1.4699999999999995e-129   NTclustered gi|1134378670|gb|KX529838.1| 114681 g18082 i0 76.539 20.3307618129219 942 180 90 30 36 969 6054 5146 Laurentiella strenua mitochondrion, complete genome blastn 21083 477 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Laurentiella Laurentiella strenua
22413460 22413460 PRJNA758088_P_NODE_238678_length_275_cov_2.222772_g231707_i0 PRJNA758088 238678 275 2.222772 6.112623 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 438 1.66e-118   NTclustered gi|300676714|gb|GQ377691.1| 151077 g231707 i0 95.604 12.12 273 12 99 0 1 273 390 118 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 3333 438 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22880988 22880988 PRJNA758088_P_NODE_221878_length_286_cov_1.131455_g214907_i0 PRJNA758088 221878 286 1.131455 3.2359613 root 1 Root_unresolved Root_unresolved 67.6 9.44e-7   NTclustered gi|11466252|ref|NC_000862.1| 5908 g214907 i0 100 12.0454545454545 36 0 13 0 6 41 7974 7939 Tetrahymena pyriformis mitochondrion, complete genome blastn 3445 67.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23687505 23687505 PRJNA758088_P_NODE_129199_length_369_cov_2.527027_g122228_i0 PRJNA758088 129199 369 2.527027 9.32472963 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 632 9.839999999999998e-177   NTclustered gi|1837628855|gb|MN158348.1| 5909 g122228 i0 97.561 82.517615176151807 369 9 100 0 1 369 4996 5364 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 30449 632 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
24965904 24965904 PRJNA758088_P_NODE_96440_length_428_cov_1.084507_g89470_i0 PRJNA758088 96440 428 1.084507 4.64168996 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 758 0   NTclustered gi|221185865|gb|FJ577812.1| 187299 g89470 i0 98.598 90.6261682242991 428 6 100 0 1 428 563 990 Uncultured ciliate clone Ivry08 18S ribosomal RNA gene, partial sequence blastn 38788 758 1 Eukaryota Sar   Ciliophora         uncultured ciliate

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;