RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA758088" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3285616 3285616 PRJNA758088_P_NODE_119783_length_383_cov_1.629032_g112813_i0 PRJNA758088 119783 383 1.629032 6.23919256 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 73.1 2.8e-8   NTclustered gi|1673122112|ref|XM_029366897.1| 94643 g112813 i0 89.474 0.490861618798956 57 6 15 0 120 176 357 301 Besnoitia besnoiti ribosomal protein RPP1 (BESB_085470), partial mRNA blastn 188 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
4566131 4566131 PRJNA758088_P_NODE_344984_length_243_cov_0.994118_g338013_i0 PRJNA758088 344984 243 0.994118 2.41570674 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 224 4.3899999999999996e-54   NTclustered gi|820695469|tpe|LN714488.1| 572307 g338013 i0 84.583 7.48559670781893 240 22 99 3 3 241 300581 300806 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1819 224 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
7115206 7115206 PRJNA758088_P_NODE_260146_length_262_cov_2.174603_g253175_i0 PRJNA758088 260146 262 2.174603 5.69745986 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 145 3.83e-30   NTclustered gi|833486015|ref|XM_012912292.1| 5866 g253175 i0 92.929 39.1717557251908 99 7 38 0 163 261 411 313 Babesia bigemina HISTONE fold protein,putative partial mRNA blastn 10263 145 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
10131993 10131993 PRJNA758088_P_NODE_206808_length_296_cov_1.286996_g199837_i0 PRJNA758088 206808 296 1.286996 3.80950816 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 547 2.8799999999999986e-151   NTclustered gi|2792507|gb|AF042107.1| 5802 g199837 i0 100 99.4324324324324 296 0 100 0 1 296 831 536 Eimeria tenella ribosomal protein S3a mRNA, complete cds blastn 29432 547 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
10942825 10942825 PRJNA758088_P_NODE_66369_length_529_cov_1.368421_g59430_i0 PRJNA758088 66369 529 1.368421 7.23894709 Plasmodium knowlesi 5850 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.001   NTclustered gi|221061126|ref|XM_002262097.1| 5851 g59430 i0 89.13 0.0869565217391304 46 5 9 0 222 267 502 457 Plasmodium knowlesi strain H drug/metabolite transporter DMT1, putative (PKNH_1424800), partial mRNA blastn 46 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
12215843 12215843 PRJNA758088_P_NODE_246650_length_271_cov_0.969697_g239679_i0 PRJNA758088 246650 271 0.969697 2.62787887 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.025   NTclustered gi|2795618130|ref|XM_068063095.1| 483139 g239679 i0 94.286 0.129151291512915 35 1 13 1 179 213 10180 10147 Cystoisospora suis uncharacterized protein (CSUI_002896), mRNA blastn 35 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
19864973 19864973 PRJNA758088_P_NODE_365556_length_241_cov_0.916667_g358585_i0 PRJNA758088 365556 241 0.916667 2.20916747 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 255 1.54e-63   NTclustered gi|820695469|tpe|LN714488.1| 572307 g358585 i0 85.833 43.4273858921162 240 34 100 0 2 241 299538 299777 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10466 255 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;