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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA756891" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA756891 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7580212 7580212 PRJNA756891_P_NODE_1706_length_630_cov_1.657092_g1639_i0 PRJNA756891 1706 630 1.657092 10.4396796 root 1 Root_unresolved Root_unresolved 65.8 8.03e-6   NTclustered gi|2490825621|gb|OP512542.1| 10345 g1639 i0 84.848 5.04761904761905 66 8 10 2 244 309 33405 33468 Suid alphaherpesvirus 1 isolate JS-XJ5, complete genome blastn 3180 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus suidalpha1
13485799 13485799 PRJNA756891_P_NODE_2751_length_505_cov_2.081019_g2683_i0 PRJNA756891 2751 505 2.081019 10.50914595 Yoloswagvirus yoloswag 2734158 Viruses Viruses 54.7 0.014   NTclustered gi|1842001691|ref|NC_047815.1| 1958956 g2683 i0 96.875 0.124752475247525 32 1 6 0 268 299 215711 215680 Erwinia phage vB_EamM_Yoloswag, complete genome blastn 63 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Yoloswagvirus Yoloswagvirus yoloswag
19053983 19053983 PRJNA756891_P_NODE_10575_length_269_cov_1.571429_g10506_i0 PRJNA756891 10575 269 1.571429 4.22714401 root 1 Root_unresolved Root_unresolved 497 2.63e-136   NTclustered gi|299721|gb|S59673.1| 11138 g10506 i0 100 97.5204460966543 269 0 100 0 1 269 2251 1983 DIssE RNA gene 1 homolog {DI-2 RNA, defective-interfering 2 RNA} [mouse hepatitis virus MHV, Genomic RNA Recombinant, 2868 nt] blastn 26233 497 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus muris
21134551 21134551 PRJNA756891_P_NODE_14437_length_246_cov_0.890173_g14368_i0 PRJNA756891 14437 246 0.890173 2.18982558 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g14368 i0 100 1 246 0 100 0 1 246 36989 36744 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 246 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21604431 21604431 PRJNA756891_P_NODE_2597_length_518_cov_1.170787_g2529_i0 PRJNA756891 2597 518 1.170787 6.06467666 Viruses 10239 Viruses Viruses 60.2 3.03e-4   NTclustered gi|2293592188|gb|OP072564.1| 38018 g2529 i0 94.872 0.150579150579151 39 1 7 1 116 153 757 719 MAG: Bacteriophage sp. isolate 3237_72095, partial genome blastn 78 60.2 1 Viruses               Bacteriophage sp.
24153943 24153943 PRJNA756891_P_NODE_8379_length_300_cov_1.356828_g8310_i0 PRJNA756891 8379 300 1.356828 4.070484 root 1 Root_unresolved Root_unresolved 555 1.7399999999999995e-153   NTclustered gi|299721|gb|S59673.1| 11138 g8310 i0 100 87.7266666666667 300 0 100 0 1 300 2729 2430 DIssE RNA gene 1 homolog {DI-2 RNA, defective-interfering 2 RNA} [mouse hepatitis virus MHV, Genomic RNA Recombinant, 2868 nt] blastn 26318 555 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus muris
24958531 24958531 PRJNA756891_P_NODE_14560_length_245_cov_1.279070_g14491_i0 PRJNA756891 14560 245 1.27907 3.1337215 Terrestrivirus sp. 2487775 Viruses Viruses 52.8 0.022   NTclustered gi|1512471161|gb|MK071982.1| 2487775 g14491 i0 100 0.114285714285714 28 0 11 0 171 198 129514 129541 MAG: Terrestrivirus sp. clone Terrestrivirus_4 genomic sequence blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;