RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA756891" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2008021 2008021 PRJNA756891_P_NODE_15422_length_243_cov_1.694118_g15353_i0 PRJNA756891 15422 243 1.694118 4.11670674 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 274 4.29e-69   NTclustered gi|2119442305|ref|XM_044695505.1| 51637 g15353 i0 87.19 48.0987654320988 242 29 99 2 3 243 22 262 Naegleria lovaniensis uncharacterized protein (C9374_005723), partial mRNA blastn 11688 274 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
3283308 3283308 PRJNA756891_P_NODE_12163_length_251_cov_0.865169_g12094_i0 PRJNA756891 12163 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 274 4.46e-69   NTclustered gi|290993241|ref|XM_002679196.1| 5762 g12094 i0 89.815 0.860557768924303 216 18 85 3 38 251 894 681 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82527), mRNA blastn 216 274 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8385270 8385270 PRJNA756891_P_NODE_12667_length_250_cov_0.870056_g12598_i0 PRJNA756891 12667 250 0.870056 2.17514 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.023   NTclustered gi|2124405446|ref|XM_044686808.1| 51637 g12598 i0 100 0.112 28 0 11 0 182 209 1880 1907 Naegleria lovaniensis uncharacterized protein (C9374_011181), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
18583854 18583854 PRJNA756891_P_NODE_10335_length_272_cov_1.547739_g10266_i0 PRJNA756891 10335 272 1.547739 4.20985008 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 307 4.8200000000000006e-79   NTclustered gi|290973118|ref|XM_002669251.1| 5762 g10266 i0 87.179 3.69852941176471 273 32 99 3 1 271 278 7 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82208), mRNA blastn 1006 307 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19859066 19859066 PRJNA756891_P_NODE_4756_length_387_cov_0.980892_g4687_i0 PRJNA756891 4756 387 0.980892 3.79605204 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52.8 0.037   NTclustered gi|290994153|ref|XM_002679651.1| 5762 g4687 i0 100 0.0723514211886305 28 0 7 0 130 157 107 134 Naegleria gruberi bromodomain-containing protein (NAEGRDRAFT_64978), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23685010 23685010 PRJNA756891_P_NODE_15279_length_244_cov_0.900585_g15210_i0 PRJNA756891 15279 244 0.900585 2.1974274 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 139 1.64e-28   NTclustered gi|2119439190|ref|XM_044694596.1| 51637 g15210 i0 78.378 1.75 222 42 90 4 25 243 4049 4267 Naegleria lovaniensis uncharacterized protein (C9374_004905), partial mRNA blastn 427 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
24958596 24958596 PRJNA756891_P_NODE_860_length_862_cov_25.766793_g805_i0 PRJNA756891 860 862 25.766793 222.10975566 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 375 4.5399999999999986e-99   NTclustered gi|290986409|ref|XM_002675871.1| 5762 g805 i0 76.714 26.7598607888631 700 147 80 14 42 732 59 751 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80121), mRNA blastn 23067 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;