RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA756891" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2008057 2008057 PRJNA756891_P_NODE_5162_length_373_cov_1.000000_g5093_i0 PRJNA756891 5162 373 1 3.73 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|1620174044|ref|XM_028682437.1| 880535 g5093 i0 100 0.0804289544235925 30 0 8 0 157 186 994 965 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_1035500), partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
7110746 7110746 PRJNA756891_P_NODE_7406_length_317_cov_2.274590_g7337_i0 PRJNA756891 7406 317 2.27459 7.2104503 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 58.4 6.38e-4   NTclustered gi|1145258134|ref|XM_012906805.2| 5854 g7337 i0 88.235 0.249211356466877 51 3 16 2 161 211 4380 4333 Plasmodium reichenowi hypothetical protein partial mRNA blastn 79 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
14760974 14760974 PRJNA756891_P_NODE_6392_length_338_cov_1.403774_g6323_i0 PRJNA756891 6392 338 1.403774 4.74475612 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 231 3.8199999999999995e-56   NTclustered gi|1620150562|ref|XM_028678648.1| 85471 g6323 i0 79.635 54.4940828402367 329 61 96 6 2 327 782 457 Plasmodium relictum polyubiquitin, putative (PRELSG_1312500), partial mRNA blastn 18419 231 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
15230807 15230807 PRJNA756891_P_NODE_9232_length_286_cov_1.920188_g9163_i0 PRJNA756891 9232 286 1.920188 5.49173768 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.68e-4   NTclustered gi|1145258288|ref|XM_012906887.2| 5854 g9163 i0 94.595 1.64685314685315 37 2 13 0 105 141 646 682 Plasmodium reichenowi hypothetical protein partial mRNA blastn 471 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
19859047 19859047 PRJNA756891_P_NODE_2236_length_557_cov_1.681818_g2168_i0 PRJNA756891 2236 557 1.681818 9.36772626 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|82540450|ref|XM_719449.1| 5861 g2168 i0 96.97 0.059245960502693 33 1 6 0 185 217 496 464 Plasmodium yoelii PUB domain-containing protein, putative (PY17X_1426000), partial mRNA blastn 33 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19859075 19859075 PRJNA756891_P_NODE_7156_length_322_cov_1.236948_g7087_i0 PRJNA756891 7156 322 1.236948 3.98297256 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2795620672|ref|XM_068064366.1| 483139 g7087 i0 100 5.40062111801242 29 0 9 0 62 90 484 456 Cystoisospora suis spc97 spc98 family protein (CSUI_004173), mRNA blastn 1739 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
21604435 21604435 PRJNA756891_P_NODE_6817_length_329_cov_0.863281_g6748_i0 PRJNA756891 6817 329 0.863281 2.84019449 root 1 Root_unresolved Root_unresolved 54.7 0.009   NTclustered gi|296004811|ref|XM_002808712.1| 36329 g6748 i0 100 0.279635258358663 29 0 9 0 137 165 3459 3431 Plasmodium falciparum 3D7 importin-7, putative (PF3D7_0706000), partial mRNA blastn 92 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;