RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA756891" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA756891 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4560420 4560420 PRJNA756891_P_NODE_16684_length_240_cov_2.155689_g16615_i0 PRJNA756891 16684 240 2.155689 5.1736536 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794970417|ref|XM_067865164.1| 2049356 g16615 i0 100 0.120833333333333 29 0 12 0 72 100 1123 1095 Monocercomonoides exilis uncharacterized protein (MONOS_12534fu12535fu12536fu13661), mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
21134580 21134580 PRJNA756891_P_NODE_4277_length_407_cov_1.176647_g4208_i0 PRJNA756891 4277 407 1.176647 4.78895329 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 6.49e-5   NTclustered gi|2794951106|ref|XM_067875127.1| 2049356 g4208 i0 92.857 0.422604422604423 42 3 10 0 65 106 3110 3069 Monocercomonoides exilis putative ubiquitin carboxyl-terminal hydrolase (MONOS_5010), mRNA blastn 172 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;