contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 730921 | 730921 | PRJNA753704_P_NODE_15841_length_302_cov_1.017467_g15480_i0 | PRJNA753704 | 15841 | 302 | 1.017467 | 3.07275034 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 375 | 1.4699999999999999e-99 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g15480 | i0 | 89.073 | 174.513245033113 | 302 | 33 | 100 | 0 | 1 | 302 | 1727840 | 1727539 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 52703 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2006975 | 2006975 | PRJNA753704_P_NODE_13502_length_324_cov_3.840637_g13141_i0 | PRJNA753704 | 13502 | 324 | 3.840637 | 12.44366388 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 154 | 8.110000000000001e-33 | NTclustered | gi|2916415364|gb|CP170459.1| | 2026799 | g13141 | i0 | 75.61 | 18.0648148148148 | 328 | 70 | 99 | 9 | 3 | 324 | 2578401 | 2578078 | MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome | blastn | 5853 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 2006999 | 2006999 | PRJNA753704_P_NODE_15982_length_300_cov_5.088106_g15621_i0 | PRJNA753704 | 15982 | 300 | 5.088106 | 15.264318 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 422 | 1.85e-113 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g15621 | i0 | 92.308 | 123.27 | 299 | 19 | 99 | 2 | 1 | 297 | 1317486 | 1317782 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 36981 | 422 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2477402 | 2477402 | PRJNA753704_P_NODE_15562_length_304_cov_1.653680_g15201_i0 | PRJNA753704 | 15562 | 304 | 1.65368 | 5.0271872 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 363 | 1.15e-95 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g15201 | i0 | 88.235 | 75.8355263157895 | 306 | 32 | 100 | 4 | 1 | 304 | 1072 | 769 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 23054 | 366 | 0.991803278688525 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 3282246 | 3282246 | PRJNA753704_P_NODE_11083_length_355_cov_3.127660_g10722_i0 | PRJNA753704 | 11083 | 355 | 3.12766 | 11.103193 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 248 | 3.99e-61 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g10722 | i0 | 79.67 | 1.02535211267606 | 364 | 58 | 99 | 14 | 2 | 355 | 2924375 | 2924732 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 364 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 3282295 | 3282295 | PRJNA753704_P_NODE_15863_length_301_cov_5.995614_g15502_i0 | PRJNA753704 | 15863 | 301 | 5.995614 | 18.04679814 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 235 | 2.59e-57 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g15502 | i0 | 81.373 | 430.893687707641 | 306 | 41 | 99 | 11 | 2 | 301 | 3411371 | 3411076 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 129699 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 4559457 | 4559457 | PRJNA753704_P_NODE_1924_length_786_cov_2.035063_g1597_i0 | PRJNA753704 | 1924 | 786 | 2.035063 | 15.99559518 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 797 | 0 | NTclustered | gi|2814788334|emb|OY762281.2| | 2026772 | g1597 | i0 | 85.733 | 236.450381679389 | 764 | 97 | 97 | 9 | 28 | 786 | 978097 | 977341 | MAG: Opitutales bacterium isolate 685e4509-010e-4797-9872-a51ee4494a19 genome assembly, chromosome: 1 | blastn | 185850 | 797 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 4559655 | 4559655 | PRJNA753704_P_NODE_824_length_1175_cov_19.828494_g595_i0 | PRJNA753704 | 824 | 1175 | 19.828494 | 232.9848045 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1650 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g595 | i0 | 92.027 | 214.738723404255 | 1179 | 86 | 100 | 6 | 1 | 1175 | 1316107 | 1314933 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 252318 | 1650 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5030398 | 5030398 | PRJNA753704_P_NODE_4864_length_514_cov_6.065760_g4504_i0 | PRJNA753704 | 4864 | 514 | 6.06576 | 31.1780064 | Fontisphaera | 3050007 | Bacteria | Bacteria | 643 | 6.529999999999998e-180 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g4504 | i0 | 89.3 | 104.20233463035 | 514 | 54 | 100 | 1 | 1 | 514 | 3991560 | 3992072 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 53560 | 643 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 5834638 | 5834638 | PRJNA753704_P_NODE_21445_length_263_cov_2.821053_g21084_i0 | PRJNA753704 | 21445 | 263 | 2.821053 | 7.41936939 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 281 | 2.81e-71 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g21084 | i0 | 87.149 | 0.946768060836502 | 249 | 30 | 94 | 2 | 17 | 263 | 680147 | 679899 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 249 | 281 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5834663 | 5834663 | PRJNA753704_P_NODE_23205_length_254_cov_1.502762_g22844_i0 | PRJNA753704 | 23205 | 254 | 1.502762 | 3.81701548 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 148 | 2.86e-31 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g22844 | i0 | 78.03 | 19.8346456692913 | 264 | 38 | 100 | 15 | 1 | 254 | 4468761 | 4469014 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 5038 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 5834761 | 5834761 | PRJNA753704_P_NODE_4065_length_556_cov_5.424431_g3706_i0 | PRJNA753704 | 4065 | 556 | 5.424431 | 30.15983636 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 869 | 0 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g3706 | i0 | 94.964 | 172.584532374101 | 556 | 24 | 100 | 2 | 1 | 556 | 557743 | 558294 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 95957 | 869 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8384252 | 8384252 | PRJNA753704_P_NODE_13967_length_319_cov_3.105691_g13606_i0 | PRJNA753704 | 13967 | 319 | 3.105691 | 9.90715429 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 139 | 2.23e-28 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g13606 | i0 | 80.978 | 0.576802507836991 | 184 | 27 | 56 | 8 | 1 | 180 | 3045937 | 3045758 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 184 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 8384397 | 8384397 | PRJNA753704_P_NODE_25887_length_247_cov_3.293103_g25526_i0 | PRJNA753704 | 25887 | 247 | 3.293103 | 8.13396441 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 248 | 2.65e-61 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g25526 | i0 | 84.921 | 2.04048582995951 | 252 | 30 | 100 | 6 | 1 | 247 | 2448363 | 2448611 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 504 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 10935202 | 10935202 | PRJNA753704_P_NODE_5449_length_488_cov_3.708434_g5088_i0 | PRJNA753704 | 5449 | 488 | 3.708434 | 18.09715792 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 453 | 1.12e-122 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g5088 | i0 | 83.707 | 143.282786885246 | 491 | 69 | 100 | 8 | 1 | 488 | 1727274 | 1727756 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 69922 | 453 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12210658 | 12210658 | PRJNA753704_P_NODE_370_length_1650_cov_13.802790_g242_i0 | PRJNA753704 | 370 | 1650 | 13.80279 | 227.746035 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 1803 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g242 | i0 | 86.448 | 231.107878787879 | 1675 | 192 | 100 | 24 | 1 | 1650 | 1668 | 4 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 381328 | 1803 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 12210703 | 12210703 | PRJNA753704_P_NODE_8070_length_410_cov_1.851632_g7709_i0 | PRJNA753704 | 8070 | 410 | 1.851632 | 7.5916912 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 619 | 8.61e-173 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g7709 | i0 | 93.902 | 106.936585365854 | 410 | 25 | 100 | 0 | 1 | 410 | 539571 | 539980 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 43844 | 619 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 13484803 | 13484803 | PRJNA753704_P_NODE_18291_length_282_cov_12.966507_g17930_i0 | PRJNA753704 | 18291 | 282 | 12.966507 | 36.56554974 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 241 | 5.17e-59 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g17930 | i0 | 82.517 | 1.8936170212766 | 286 | 39 | 100 | 10 | 1 | 282 | 1683029 | 1683307 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 534 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14760006 | 14760006 | PRJNA753704_P_NODE_2392_length_707_cov_2.812303_g2053_i0 | PRJNA753704 | 2392 | 707 | 2.812303 | 19.88298221 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 1033 | 0 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g2053 | i0 | 93.108 | 79.6562942008487 | 711 | 39 | 99 | 8 | 3 | 707 | 2586 | 1880 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 56317 | 1033 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 16504981 | 16504981 | PRJNA753704_P_NODE_2453_length_701_cov_2.759554_g2113_i0 | PRJNA753704 | 2453 | 701 | 2.759554 | 19.34447354 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 488 | 4.4999999999999985e-133 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g2113 | i0 | 79.466 | 97.9472182596291 | 711 | 128 | 100 | 16 | 1 | 701 | 721 | 19 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 68661 | 488 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 18583021 | 18583021 | PRJNA753704_P_NODE_375_length_1641_cov_9.331633_g246_i0 | PRJNA753704 | 375 | 1641 | 9.331633 | 153.13209753 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 1345 | 0 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g246 | i0 | 81.65 | 172.392443631932 | 1673 | 260 | 100 | 37 | 1 | 1641 | 3862696 | 3861039 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 282896 | 1345 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 21133646 | 21133646 | PRJNA753704_P_NODE_25877_length_247_cov_3.885057_g25516_i0 | PRJNA753704 | 25877 | 247 | 3.885057 | 9.59609079 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 231 | 2.6699999999999997e-56 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g25516 | i0 | 88.83 | 263.939271255061 | 188 | 21 | 76 | 0 | 2 | 189 | 3261597 | 3261410 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 65193 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 21133760 | 21133760 | PRJNA753704_P_NODE_8137_length_408_cov_5.205970_g7776_i0 | PRJNA753704 | 8137 | 408 | 5.20597 | 21.2403576 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 279 | 1.65e-70 | NTclustered | gi|110753282|gb|DQ827969.1| | 156588 | g7776 | i0 | 84.106 | 71.6936274509804 | 302 | 35 | 73 | 11 | 1 | 296 | 295 | 1 | Uncultured Verrucomicrobia bacterium clone DOK_BIODYN_clone279 16S ribosomal RNA gene, partial sequence | blastn | 29251 | 279 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 23684003 | 23684003 | PRJNA753704_P_NODE_17159_length_291_cov_1.018349_g16798_i0 | PRJNA753704 | 17159 | 291 | 1.018349 | 2.96339559 | Opitutus terrae | 107709 | Bacteria | Bacteria | 322 | 1.86e-83 | NTclustered | gi|177839040|gb|CP001032.1| | 452637 | g16798 | i0 | 88.043 | 2.94158075601375 | 276 | 28 | 95 | 4 | 1 | 275 | 4393426 | 4393697 | Opitutus terrae PB90-1, complete genome | blastn | 856 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 23684190 | 23684190 | PRJNA753704_P_NODE_659_length_1290_cov_7.337716_g462_i0 | PRJNA753704 | 659 | 1290 | 7.337716 | 94.6565364 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 957 | 0 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g462 | i0 | 80.526 | 76.7069767441861 | 1294 | 213 | 98 | 31 | 1 | 1268 | 5153590 | 5152310 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 98952 | 957 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24957500 | 24957500 | PRJNA753704_P_NODE_13980_length_319_cov_2.528455_g13619_i0 | PRJNA753704 | 13980 | 319 | 2.528455 | 8.06577145 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 281 | 3.5000000000000007e-71 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g13619 | i0 | 82.675 | 2.7115987460815 | 329 | 45 | 100 | 11 | 1 | 319 | 2925045 | 2924719 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 865 | 281 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;