contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 731100 | 731100 | PRJNA753704_P_NODE_3601_length_589_cov_7.817829_g3244_i0 | PRJNA753704 | 3601 | 589 | 7.817829 | 46.04701281 | Archangium violaceum | 83451 | Bacteria | Bacteria | 459 | 2.94e-124 | NTclustered | gi|2579675135|gb|CP043493.1| | 83451 | g3244 | i0 | 81.037 | 400.269949066214 | 617 | 81 | 100 | 23 | 1 | 589 | 5180760 | 5181368 | Archangium violaceum strain Cbvi 34 chromosome, complete genome | blastn | 235759 | 459 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 731143 | 731143 | PRJNA753704_P_NODE_8141_length_408_cov_3.856716_g7780_i0 | PRJNA753704 | 8141 | 408 | 3.856716 | 15.73540128 | Vulgatibacter incomptus | 1391653 | Bacteria | Bacteria | 268 | 3.57e-67 | NTclustered | gi|913607065|gb|CP012332.1| | 1391653 | g7780 | i0 | 79.5 | 113.203431372549 | 400 | 64 | 97 | 13 | 11 | 404 | 179000 | 178613 | Vulgatibacter incomptus strain DSM 27710, complete genome | blastn | 46187 | 268 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Vulgatibacteraceae | Vulgatibacter | Vulgatibacter incomptus | ||
| 2007174 | 2007174 | PRJNA753704_P_NODE_342_length_1703_cov_19.836810_g224_i0 | PRJNA753704 | 342 | 1703 | 19.83681 | 337.8208743 | Minicystis rosea | 888845 | Bacteria | Bacteria | 1934 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g224 | i0 | 87.194 | 162.386376981797 | 1718 | 198 | 100 | 17 | 1 | 1703 | 13715061 | 13716771 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 276544 | 1934 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 5834624 | 5834624 | PRJNA753704_P_NODE_20445_length_269_cov_1.632653_g20084_i0 | PRJNA753704 | 20445 | 269 | 1.632653 | 4.39183657 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 414 | 2.73e-111 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g20084 | i0 | 94.424 | 134.598513011152 | 269 | 15 | 100 | 0 | 1 | 269 | 7090058 | 7090326 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 36207 | 414 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 7109743 | 7109743 | PRJNA753704_P_NODE_20746_length_267_cov_2.304124_g20385_i0 | PRJNA753704 | 20746 | 267 | 2.304124 | 6.15201108 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 361 | 3.57e-95 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g20385 | i0 | 91.011 | 273.142322097378 | 267 | 24 | 100 | 0 | 1 | 267 | 9037950 | 9038216 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 72929 | 361 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 8854970 | 8854970 | PRJNA753704_P_NODE_1167_length_1002_cov_139.393972_g191_i1 | PRJNA753704 | 1167 | 1002 | 139.393972 | 1396.72759944 | Haliangium | 162027 | Bacteria | Bacteria | 869 | 0 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g191 | i1 | 82.493 | 137.60878243513 | 1011 | 157 | 100 | 13 | 1 | 1002 | 758 | 1757 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 137884 | 869 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 12210609 | 12210609 | PRJNA753704_P_NODE_27550_length_244_cov_0.912281_g27189_i0 | PRJNA753704 | 27550 | 244 | 0.912281 | 2.22596564 | Minicystis rosea | 888845 | Bacteria | Bacteria | 396 | 8.829999999999997e-106 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g27189 | i0 | 95.935 | 159.200819672131 | 246 | 6 | 100 | 4 | 1 | 244 | 15982009 | 15982252 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 38845 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 12210640 | 12210640 | PRJNA753704_P_NODE_30450_length_221_cov_6.283784_g30089_i0 | PRJNA753704 | 30450 | 221 | 6.283784 | 13.88716264 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 348 | 2.23e-91 | NTclustered | gi|1386873111|gb|MF774778.1| | 1962667 | g30089 | i0 | 95.023 | 157.83257918552 | 221 | 11 | 100 | 0 | 1 | 221 | 94 | 314 | Nannocystis sp. strain MNa11734 23S ribosomal RNA gene, partial sequence | blastn | 34881 | 348 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 13484749 | 13484749 | PRJNA753704_P_NODE_13651_length_323_cov_0.932000_g13290_i0 | PRJNA753704 | 13651 | 323 | 0.932 | 3.01036 | Minicystis rosea | 888845 | Bacteria | Bacteria | 167 | 1.0400000000000001e-36 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g13290 | i0 | 76.398 | 18.9318885448916 | 322 | 69 | 99 | 6 | 3 | 323 | 769802 | 769487 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 6115 | 167 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 18583016 | 18583016 | PRJNA753704_P_NODE_335_length_1730_cov_73.863005_g218_i0 | PRJNA753704 | 335 | 1730 | 73.863005 | 1277.8299865 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 2244 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g218 | i0 | 90.15 | 156.367052023121 | 1736 | 156 | 100 | 13 | 1 | 1730 | 9854137 | 9852411 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 270515 | 2244 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 21133582 | 21133582 | PRJNA753704_P_NODE_19737_length_273_cov_3.355000_g19376_i0 | PRJNA753704 | 19737 | 273 | 3.355 | 9.15915 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 230 | 1.0799999999999998e-55 | NTclustered | gi|309390350|gb|CP002271.1| | 378806 | g19376 | i0 | 87.56 | 69.3150183150183 | 209 | 13 | 73 | 9 | 49 | 248 | 7829237 | 7829441 | Stigmatella aurantiaca DW4/3-1, complete genome | blastn | 18923 | 230 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 22879598 | 22879598 | PRJNA753704_P_NODE_178_length_2185_cov_197.557765_g101_i0 | PRJNA753704 | 178 | 2185 | 197.557765 | 4316.63716525 | Pendulispora | 3375062 | Bacteria | Bacteria | 2237 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g101 | i0 | 86.935 | 168.670480549199 | 2036 | 213 | 92 | 44 | 1 | 2004 | 9852174 | 9854188 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 368545 | 2239 | 0.99910674408218 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 22879688 | 22879688 | PRJNA753704_P_NODE_338_length_1719_cov_80.707776_g218_i1 | PRJNA753704 | 338 | 1719 | 80.707776 | 1387.36666944 | Pendulispora | 3375062 | Bacteria | Bacteria | 2211 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g218 | i1 | 89.925 | 157.269924374636 | 1727 | 158 | 100 | 14 | 1 | 1719 | 9854137 | 9852419 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 270347 | 2211 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 22879705 | 22879705 | PRJNA753704_P_NODE_7798_length_416_cov_9.912536_g7437_i0 | PRJNA753704 | 7798 | 416 | 9.912536 | 41.236149760000004 | Myxococcales | 29 | Bacteria | Bacteria | 586 | 8.87e-163 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g7437 | i0 | 92.067 | 317.245192307692 | 416 | 33 | 100 | 0 | 1 | 416 | 3637 | 3222 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 131974 | 586 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 24957684 | 24957684 | PRJNA753704_P_NODE_30640_length_216_cov_4.727273_g30279_i0 | PRJNA753704 | 30640 | 216 | 4.727273 | 10.21090968 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 296 | 7.98e-76 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g30279 | i0 | 91.284 | 295.481481481481 | 218 | 17 | 100 | 2 | 1 | 216 | 3590426 | 3590643 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 63824 | 296 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;