RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7109716 7109716 PRJNA753704_P_NODE_18146_length_284_cov_1.047393_g17785_i0 PRJNA753704 18146 284 1.047393 2.97459612 Cokeromyces recurvatus 90255 Fungi Fungi 167 8.979999999999999e-37   NTclustered gi|2324065238|ref|XM_051531249.1| 90255 g17785 i0 81.429 61.2112676056338 210 33 73 5 73 279 261 55 Cokeromyces recurvatus translation protein SH3-like domain-containing protein (BX663DRAFT_550925), partial mRNA blastn 17384 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
7580072 7580072 PRJNA753704_P_NODE_6246_length_460_cov_3.832041_g5885_i0 PRJNA753704 6246 460 3.832041 17.6273886 Opisthokonta 33154 Fungi Fungi 357 8.45e-94   NTclustered gi|2837758538|ref|XM_069382418.1| 4840 g5885 i0 81.699 92.3326086956522 459 57 99 15 5 460 1076 642 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_3806), partial mRNA blastn 42473 359 0.994428969359331 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;