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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4559652 4559652 PRJNA753704_P_NODE_8044_length_410_cov_26.925816_g7683_i0 PRJNA753704 8044 410 26.925816 110.3958456 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 143 2.27e-29   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g7683 i0 89.565 1.31951219512195 115 8 28 3 1 113 506 394 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 541 143 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
5834558 5834558 PRJNA753704_P_NODE_15045_length_309_cov_1.322034_g14684_i0 PRJNA753704 15045 309 1.322034 4.08508506 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 302 2.59e-77   NTclustered gi|2233316042|emb|OW569396.1| 166959 g14684 i0 84.365 85.8187702265372 307 48 99 0 3 309 35807 36113 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 26518 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
9659669 9659669 PRJNA753704_P_NODE_5288_length_496_cov_1.550827_g4927_i0 PRJNA753704 5288 496 1.550827 7.69210192 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 917 0   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g4927 i0 100 20.5504032258065 496 0 100 0 1 496 506 1001 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 10193 917 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
10935047 10935047 PRJNA753704_P_NODE_1969_length_775_cov_25.465812_g1638_i0 PRJNA753704 1969 775 25.465812 197.360043 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 276 4.24e-69   NTclustered gi|2233316042|emb|OW569396.1| 166959 g1638 i0 74.783 26.418064516129 690 137 86 31 1 664 19255 18577 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 20474 276 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
12210625 12210625 PRJNA753704_P_NODE_290_length_1813_cov_27.122414_g181_i0 PRJNA753704 290 1813 27.122414 491.72936582 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 494 2.579999999999999e-134   NTclustered gi|2233316042|emb|OW569396.1| 166959 g181 i0 74.901 10.6778819635962 1259 229 67 65 587 1809 20900 22107 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 19359 494 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
13484939 13484939 PRJNA753704_P_NODE_311_length_1778_cov_107.283871_g198_i0 PRJNA753704 311 1778 107.283871 1907.50722638 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 3064 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g198 i0 97.753 32.0832395950506 1780 38 100 2 1 1778 2594 4373 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 57044 3064 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14760058 14760058 PRJNA753704_P_NODE_2852_length_654_cov_23.932874_g2501_i0 PRJNA753704 2852 654 23.932874 156.52099596 Acrasis kona 1008807 Heterolobosea other_Eukaryota 339 4.46e-88   NTclustered gi|756877081|ref|NC_026286.1| 1008807 g2501 i0 84.375 78.1804281345566 352 47 53 7 21 367 2784 2436 Acrasis kona culture-collection ATCC:MYA-3509 mitochondrion, complete genome blastn 51130 339 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
14760145 14760145 PRJNA753704_P_NODE_92_length_2748_cov_10.864299_g45_i0 PRJNA753704 92 2748 10.864299 298.55093652 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 412 1.1399999999999998e-109   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g45 i0 81.89 28.5687772925764 508 74 62 16 1468 1966 13811 13313 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 78507 412 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
16033560 16033560 PRJNA753704_P_NODE_113_length_2611_cov_27.580378_g57_i0 PRJNA753704 113 2611 27.580378 720.12366958 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 496 1.0399999999999998e-134   NTclustered gi|11466174|ref|NC_002573.1| 5762 g57 i0 75.642 26.1030256606664 1129 203 42 56 1509 2604 1558 2647 Naegleria gruberi mitochondrion, complete genome blastn 68155 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16033807 16033807 PRJNA753704_P_NODE_4573_length_529_cov_3.179825_g4214_i0 PRJNA753704 4573 529 3.179825 16.82127425 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 213 2.25e-50   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g4214 i0 77.344 2.41587901701323 384 71 71 13 8 384 15947 16321 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 1278 213 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
16033818 16033818 PRJNA753704_P_NODE_5313_length_494_cov_5.881235_g4952_i0 PRJNA753704 5313 494 5.881235 29.0533009 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 163 2.14e-35   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g4952 i0 91.597 24.2044534412955 119 8 24 2 358 475 3856 3973 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11957 163 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
18582947 18582947 PRJNA753704_P_NODE_24695_length_250_cov_1.293785_g24334_i0 PRJNA753704 24695 250 1.293785 3.2344625 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 183 7.7e-42   NTclustered gi|2124388354|ref|XM_044708984.1| 5763 g24334 i0 81.092 6.824 238 38 94 7 16 249 366 132 Naegleria fowleri uncharacterized protein (FDP41_005458), partial mRNA blastn 1706 183 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
21133506 21133506 PRJNA753704_P_NODE_1277_length_963_cov_6.516854_g987_i0 PRJNA753704 1277 963 6.516854 62.75730402 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 244 1.5e-59   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g987 i0 80 17.0197300103842 350 55 36 11 221 562 17188 16846 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 16390 244 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
23684067 23684067 PRJNA753704_P_NODE_2299_length_721_cov_2.101852_g1964_i0 PRJNA753704 2299 721 2.101852 15.15435292 Acrasis rosea 43695 Heterolobosea other_Eukaryota 789 0   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g1964 i0 86.464 76.9084604715673 724 92 100 6 1 721 191 911 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 55451 789 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
23684088 23684088 PRJNA753704_P_NODE_25519_length_248_cov_1.531429_g25158_i0 PRJNA753704 25519 248 1.531429 3.79794392 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 56.5 0.002   NTclustered gi|2119426233|ref|XM_044701013.1| 5763 g25158 i0 90.698 0.346774193548387 43 3 17 1 45 86 470 428 Naegleria fowleri uncharacterized protein (FDP41_010688), partial mRNA blastn 86 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24957459 24957459 PRJNA753704_P_NODE_1020_length_1071_cov_143.854709_g770_i0 PRJNA753704 1020 1071 143.854709 1540.68393339 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1718 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g770 i0 95.616 27.3249299719888 1072 45 100 2 1 1071 1555 2625 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29265 1718 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
24957695 24957695 PRJNA753704_P_NODE_3480_length_599_cov_6.541825_g3124_i0 PRJNA753704 3480 599 6.541825 39.18553175 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 171 1.57e-37   NTclustered gi|2233316042|emb|OW569396.1| 166959 g3124 i0 75.328 4.7779632721202 381 80 63 11 127 503 19812 19442 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 2862 171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;