RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15230591 15230591 PRJNA753704_P_NODE_2332_length_716_cov_8.872473_g1996_i0 PRJNA753704 2332 716 8.872473 63.52690668 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 187 1.8799999999999994e-42   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g1996 i0 81.858 45.9357541899441 226 37 33 4 407 632 26608682 26608461 Eunicella cavolini genome assembly, chromosome: 3 blastn 32890 187 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
24957461 24957461 PRJNA753704_P_NODE_10560_length_363_cov_25.389655_g10199_i0 PRJNA753704 10560 363 25.389655 92.16444765 Mastigias albipunctata 3143520 Cnidaria other_Eukaryota 128 5.56e-25   NTclustered gi|2862235117|gb|PQ647264.1| 3143520 g10199 i0 93.103 24.1652892561983 87 6 32 0 274 360 3045 2959 Mastigias albipunctata isolate AGC18067 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8772 128 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Mastigiidae Mastigias Mastigias albipunctata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;